Gene : Bradi2g19560 B. distachyon v3.1
Defline:  (1 of 1) K14558 - periodic tryptophan protein 2 (PWP2, UTP1) Genomic Order:  2493
Name:  ? Bradi2g19560 Secondary Identifier:  ? PAC:32780052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g19560 0.5kb upstream 0.5kb upstream 4827 true Bd2: 17207833-17212659 Brachypodium distachyon
Bradi2g19560 0.5kb upstream 0.5kb upstream 500 false Bd2: 17212160-17212659 Brachypodium distachyon
Bradi2g19560 0.5kb downstream 0.5kb downstream 4827 true Bd2: 17207333-17212159 Brachypodium distachyon
Bradi2g19560 0.5kb downstream 0.5kb downstream 500 false Bd2: 17207333-17207832 Brachypodium distachyon
Bradi2g19560 1.0kb upstream 1.0kb upstream 5327 true Bd2: 17207833-17213159 Brachypodium distachyon
Bradi2g19560 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17212160-17213159 Brachypodium distachyon
Bradi2g19560 1.0kb downstream 1.0kb downstream 5327 true Bd2: 17206833-17212159 Brachypodium distachyon
Bradi2g19560 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17206833-17207832 Brachypodium distachyon
Bradi2g19560 2.0kb upstream 2.0kb upstream 6327 true Bd2: 17207833-17214159 Brachypodium distachyon
Bradi2g19560 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17212160-17214159 Brachypodium distachyon
Bradi2g19560 2.0kb downstream 2.0kb downstream 6327 true Bd2: 17205833-17212159 Brachypodium distachyon
Bradi2g19560 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17205833-17207832 Brachypodium distachyon
Bradi2g19560 5.0kb upstream 5.0kb upstream 9327 true Bd2: 17207833-17217159 Brachypodium distachyon
Bradi2g19560 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17212160-17217159 Brachypodium distachyon
Bradi2g19560 5.0kb downstream 5.0kb downstream 9327 true Bd2: 17202833-17212159 Brachypodium distachyon
Bradi2g19560 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17202833-17207832 Brachypodium distachyon
Bradi2g19560 10.0kb upstream 10.0kb upstream 14327 true Bd2: 17207833-17222159 Brachypodium distachyon
Bradi2g19560 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17212160-17222159 Brachypodium distachyon
Bradi2g19560 10.0kb downstream 10.0kb downstream 14327 true Bd2: 17197833-17212159 Brachypodium distachyon
Bradi2g19560 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17197833-17207832 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571485 5269 Grass View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.934        
cufflinks 8.667        
cufflinks 6.21        
cufflinks 6.889        
cufflinks 1.654       Low
cufflinks 7.316        
cufflinks 7.277        
cufflinks 5.95        
cufflinks 6.581        
cufflinks 3.066        
cufflinks 1.483       Low
cufflinks 5.613        
cufflinks 0.997       Low
cufflinks 1.048       Low
cufflinks 1.49       Low
cufflinks 8.141        
cufflinks 4.172        
cufflinks 19.009     High High
cufflinks 3.462        
cufflinks 0.437       Low
cufflinks 5.43        
cufflinks 4.894        
cufflinks 4.993        
cufflinks 4.764        
cufflinks 6.537        
cufflinks 4.463        
cufflinks 1.561       Low
cufflinks 3.471        
cufflinks 3.775        
cufflinks 7.416        

0 Strain