Gene : Bradi2g19980 B. distachyon v3.1
Defline:  (1 of 1) K01259 - proline iminopeptidase (pip) Genomic Order:  2546
Name:  ? Bradi2g19980 Secondary Identifier:  ? PAC:32776819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g19980 0.5kb upstream 0.5kb upstream 4343 true Bd2: 17564107-17568449 Brachypodium distachyon
Bradi2g19980 0.5kb upstream 0.5kb upstream 500 false Bd2: 17564107-17564606 Brachypodium distachyon
Bradi2g19980 0.5kb downstream 0.5kb downstream 4343 true Bd2: 17564607-17568949 Brachypodium distachyon
Bradi2g19980 0.5kb downstream 0.5kb downstream 500 false Bd2: 17568450-17568949 Brachypodium distachyon
Bradi2g19980 1.0kb upstream 1.0kb upstream 4843 true Bd2: 17563607-17568449 Brachypodium distachyon
Bradi2g19980 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17563607-17564606 Brachypodium distachyon
Bradi2g19980 1.0kb downstream 1.0kb downstream 4843 true Bd2: 17564607-17569449 Brachypodium distachyon
Bradi2g19980 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17568450-17569449 Brachypodium distachyon
Bradi2g19980 2.0kb upstream 2.0kb upstream 5843 true Bd2: 17562607-17568449 Brachypodium distachyon
Bradi2g19980 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17562607-17564606 Brachypodium distachyon
Bradi2g19980 2.0kb downstream 2.0kb downstream 5843 true Bd2: 17564607-17570449 Brachypodium distachyon
Bradi2g19980 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17568450-17570449 Brachypodium distachyon
Bradi2g19980 5.0kb upstream 5.0kb upstream 8843 true Bd2: 17559607-17568449 Brachypodium distachyon
Bradi2g19980 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17559607-17564606 Brachypodium distachyon
Bradi2g19980 5.0kb downstream 5.0kb downstream 8843 true Bd2: 17564607-17573449 Brachypodium distachyon
Bradi2g19980 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17568450-17573449 Brachypodium distachyon
Bradi2g19980 10.0kb upstream 10.0kb upstream 13843 true Bd2: 17554607-17568449 Brachypodium distachyon
Bradi2g19980 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17554607-17564606 Brachypodium distachyon
Bradi2g19980 10.0kb downstream 10.0kb downstream 13843 true Bd2: 17564607-17578449 Brachypodium distachyon
Bradi2g19980 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17568450-17578449 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569145 5269 Grass View MSA
122043624 5273 Angiosperm View MSA
121345723 5274 Embryophyte View MSA
123427768 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.385        
cufflinks 2.355        
cufflinks 2.713        
cufflinks 3.067       High
cufflinks 2.315        
cufflinks 1.985        
cufflinks 2.105        
cufflinks 2.285        
cufflinks 2.119        
cufflinks 2.087        
cufflinks 2.151        
cufflinks 1.974        
cufflinks 1.082       Low
cufflinks 1.798        
cufflinks 2.209        
cufflinks 2.33        
cufflinks 2.37        
cufflinks 3.241       High
cufflinks 3.389       High
cufflinks 1.503       Low
cufflinks 3.428       High
cufflinks 2.072        
cufflinks 2.32        
cufflinks 2.017        
cufflinks 2.052        
cufflinks 2.796        
cufflinks 1.206       Low
cufflinks 2.48        
cufflinks 2.152        
cufflinks 2.666        

0 Strain