Gene : Bradi2g20600 B. distachyon v3.1
Genomic Order:  2619 Name:  ? Bradi2g20600
Secondary Identifier:  ? PAC:32774687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20600 0.5kb upstream 0.5kb upstream 4478 true Bd2: 18080624-18085101 Brachypodium distachyon
Bradi2g20600 0.5kb upstream 0.5kb upstream 500 false Bd2: 18080624-18081123 Brachypodium distachyon
Bradi2g20600 0.5kb downstream 0.5kb downstream 4478 true Bd2: 18081124-18085601 Brachypodium distachyon
Bradi2g20600 0.5kb downstream 0.5kb downstream 500 false Bd2: 18085102-18085601 Brachypodium distachyon
Bradi2g20600 1.0kb upstream 1.0kb upstream 4978 true Bd2: 18080124-18085101 Brachypodium distachyon
Bradi2g20600 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18080124-18081123 Brachypodium distachyon
Bradi2g20600 1.0kb downstream 1.0kb downstream 4978 true Bd2: 18081124-18086101 Brachypodium distachyon
Bradi2g20600 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18085102-18086101 Brachypodium distachyon
Bradi2g20600 2.0kb upstream 2.0kb upstream 5978 true Bd2: 18079124-18085101 Brachypodium distachyon
Bradi2g20600 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18079124-18081123 Brachypodium distachyon
Bradi2g20600 2.0kb downstream 2.0kb downstream 5978 true Bd2: 18081124-18087101 Brachypodium distachyon
Bradi2g20600 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18085102-18087101 Brachypodium distachyon
Bradi2g20600 5.0kb upstream 5.0kb upstream 8978 true Bd2: 18076124-18085101 Brachypodium distachyon
Bradi2g20600 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18076124-18081123 Brachypodium distachyon
Bradi2g20600 5.0kb downstream 5.0kb downstream 8978 true Bd2: 18081124-18090101 Brachypodium distachyon
Bradi2g20600 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18085102-18090101 Brachypodium distachyon
Bradi2g20600 10.0kb upstream 10.0kb upstream 13978 true Bd2: 18071124-18085101 Brachypodium distachyon
Bradi2g20600 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18071124-18081123 Brachypodium distachyon
Bradi2g20600 10.0kb downstream 10.0kb downstream 13978 true Bd2: 18081124-18095101 Brachypodium distachyon
Bradi2g20600 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18085102-18095101 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026569 5273 Angiosperm View MSA
124577465 5269 Grass View MSA
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.659        
cufflinks 5.727        
cufflinks 4.508        
cufflinks 5.344        
cufflinks 2.301       Low
cufflinks 6.363        
cufflinks 6.371        
cufflinks 4.582        
cufflinks 5.596        
cufflinks 3.976        
cufflinks 9.018     High High
cufflinks 4.81        
cufflinks 6.184        
cufflinks 8.756     High High
cufflinks 4.807        
cufflinks 6.069        
cufflinks 4.006        
cufflinks 0.868       Low
cufflinks 3.995        
cufflinks 2.93        
cufflinks 2.555        
cufflinks 3.725        
cufflinks 4.253        
cufflinks 5.942        
cufflinks 6.718        
cufflinks 4.761        
cufflinks 8.119       High
cufflinks 4.79        
cufflinks 4.1        
cufflinks 2.691        

0 Strain