Gene : Bradi4g28877 B. distachyon v3.1
Defline:  (1 of 1) PTHR12072:SF4 - CWF19-LIKE PROTEIN 1 Genomic Order:  3702
Name:  ? Bradi4g28877 Secondary Identifier:  ? PAC:32786709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28877 0.5kb upstream 0.5kb upstream 4654 true Bd4: 34162463-34167116 Brachypodium distachyon
Bradi4g28877 0.5kb upstream 0.5kb upstream 500 false Bd4: 34162463-34162962 Brachypodium distachyon
Bradi4g28877 0.5kb downstream 0.5kb downstream 4654 true Bd4: 34162963-34167616 Brachypodium distachyon
Bradi4g28877 0.5kb downstream 0.5kb downstream 500 false Bd4: 34167117-34167616 Brachypodium distachyon
Bradi4g28877 1.0kb upstream 1.0kb upstream 5154 true Bd4: 34161963-34167116 Brachypodium distachyon
Bradi4g28877 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34161963-34162962 Brachypodium distachyon
Bradi4g28877 1.0kb downstream 1.0kb downstream 5154 true Bd4: 34162963-34168116 Brachypodium distachyon
Bradi4g28877 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34167117-34168116 Brachypodium distachyon
Bradi4g28877 2.0kb upstream 2.0kb upstream 6154 true Bd4: 34160963-34167116 Brachypodium distachyon
Bradi4g28877 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34160963-34162962 Brachypodium distachyon
Bradi4g28877 2.0kb downstream 2.0kb downstream 6154 true Bd4: 34162963-34169116 Brachypodium distachyon
Bradi4g28877 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34167117-34169116 Brachypodium distachyon
Bradi4g28877 5.0kb upstream 5.0kb upstream 9154 true Bd4: 34157963-34167116 Brachypodium distachyon
Bradi4g28877 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34157963-34162962 Brachypodium distachyon
Bradi4g28877 5.0kb downstream 5.0kb downstream 9154 true Bd4: 34162963-34172116 Brachypodium distachyon
Bradi4g28877 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34167117-34172116 Brachypodium distachyon
Bradi4g28877 10.0kb upstream 10.0kb upstream 14154 true Bd4: 34152963-34167116 Brachypodium distachyon
Bradi4g28877 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34152963-34162962 Brachypodium distachyon
Bradi4g28877 10.0kb downstream 10.0kb downstream 14154 true Bd4: 34162963-34177116 Brachypodium distachyon
Bradi4g28877 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34167117-34177116 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026236 5273 Angiosperm View MSA
124578526 5269 Grass View MSA
121344253 5274 Embryophyte View MSA
123426244 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.699        
cufflinks 2.468        
cufflinks 2.568        
cufflinks 2.386        
cufflinks 1.573        
cufflinks 2.175        
cufflinks 2.084        
cufflinks 2.211        
cufflinks 2.3        
cufflinks 1.972        
cufflinks 1.359       Low
cufflinks 2.009        
cufflinks 1.255       Low
cufflinks 1.198       Low
cufflinks 1.643        
cufflinks 2.113        
cufflinks 1.931        
cufflinks 3.347       High
cufflinks 1.914        
cufflinks 0.74       Low
cufflinks 2.166        
cufflinks 2.243        
cufflinks 2.073        
cufflinks 1.89        
cufflinks 2.133        
cufflinks 2.465        
cufflinks 1.626        
cufflinks 2.295        
cufflinks 2.191        
cufflinks 2.513        

0 Strain