Gene : Bradi2g20810 B. distachyon v3.1
Defline:  (1 of 1) PTHR21530:SF0 - TRAB DOMAIN-CONTAINING PROTEIN Genomic Order:  2644
Name:  ? Bradi2g20810 Secondary Identifier:  ? PAC:32775775
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20810 0.5kb upstream 0.5kb upstream 4220 true Bd2: 18250087-18254306 Brachypodium distachyon
Bradi2g20810 0.5kb upstream 0.5kb upstream 500 false Bd2: 18250087-18250586 Brachypodium distachyon
Bradi2g20810 0.5kb downstream 0.5kb downstream 4220 true Bd2: 18250587-18254806 Brachypodium distachyon
Bradi2g20810 0.5kb downstream 0.5kb downstream 500 false Bd2: 18254307-18254806 Brachypodium distachyon
Bradi2g20810 1.0kb upstream 1.0kb upstream 4720 true Bd2: 18249587-18254306 Brachypodium distachyon
Bradi2g20810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18249587-18250586 Brachypodium distachyon
Bradi2g20810 1.0kb downstream 1.0kb downstream 4720 true Bd2: 18250587-18255306 Brachypodium distachyon
Bradi2g20810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18254307-18255306 Brachypodium distachyon
Bradi2g20810 2.0kb upstream 2.0kb upstream 5720 true Bd2: 18248587-18254306 Brachypodium distachyon
Bradi2g20810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18248587-18250586 Brachypodium distachyon
Bradi2g20810 2.0kb downstream 2.0kb downstream 5720 true Bd2: 18250587-18256306 Brachypodium distachyon
Bradi2g20810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18254307-18256306 Brachypodium distachyon
Bradi2g20810 5.0kb upstream 5.0kb upstream 8720 true Bd2: 18245587-18254306 Brachypodium distachyon
Bradi2g20810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18245587-18250586 Brachypodium distachyon
Bradi2g20810 5.0kb downstream 5.0kb downstream 8720 true Bd2: 18250587-18259306 Brachypodium distachyon
Bradi2g20810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18254307-18259306 Brachypodium distachyon
Bradi2g20810 10.0kb upstream 10.0kb upstream 13720 true Bd2: 18240587-18254306 Brachypodium distachyon
Bradi2g20810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18240587-18250586 Brachypodium distachyon
Bradi2g20810 10.0kb downstream 10.0kb downstream 13720 true Bd2: 18250587-18264306 Brachypodium distachyon
Bradi2g20810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18254307-18264306 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577666 5269 Grass View MSA
122042571 5273 Angiosperm View MSA
121350143 5274 Embryophyte View MSA
123427103 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.086     High  
cufflinks 6.128        
cufflinks 7.631        
cufflinks 7.22        
cufflinks 9.968     High  
cufflinks 5.299       Low
cufflinks 5.46       Low
cufflinks 6.306        
cufflinks 5.517       Low
cufflinks 11.827     High  
cufflinks 4.157       Low
cufflinks 5.742        
cufflinks 4.078       Low
cufflinks 4.347       Low
cufflinks 9.317     High  
cufflinks 5.871        
cufflinks 12.36     High  
cufflinks 9.669        
cufflinks 12.005        
cufflinks 15.158     High High
cufflinks 13.175     High High
cufflinks 9.978        
cufflinks 7.24        
cufflinks 6.18        
cufflinks 7.197        
cufflinks 12.497     High  
cufflinks 6.0        
cufflinks 11.955     High  
cufflinks 11.298     High  
cufflinks 9.004        

0 Strain