Gene : Bradi2g26310 B. distachyon v3.1
Defline:  (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC Genomic Order:  3352
Name:  ? Bradi2g26310 Secondary Identifier:  ? PAC:32774349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g26310 0.5kb upstream 0.5kb upstream 12834 true Bd2: 24722099-24734932 Brachypodium distachyon
Bradi2g26310 0.5kb upstream 0.5kb upstream 500 false Bd2: 24734433-24734932 Brachypodium distachyon
Bradi2g26310 0.5kb downstream 0.5kb downstream 12834 true Bd2: 24721599-24734432 Brachypodium distachyon
Bradi2g26310 0.5kb downstream 0.5kb downstream 500 false Bd2: 24721599-24722098 Brachypodium distachyon
Bradi2g26310 1.0kb upstream 1.0kb upstream 13334 true Bd2: 24722099-24735432 Brachypodium distachyon
Bradi2g26310 1.0kb upstream 1.0kb upstream 1000 false Bd2: 24734433-24735432 Brachypodium distachyon
Bradi2g26310 1.0kb downstream 1.0kb downstream 13334 true Bd2: 24721099-24734432 Brachypodium distachyon
Bradi2g26310 1.0kb downstream 1.0kb downstream 1000 false Bd2: 24721099-24722098 Brachypodium distachyon
Bradi2g26310 2.0kb upstream 2.0kb upstream 14334 true Bd2: 24722099-24736432 Brachypodium distachyon
Bradi2g26310 2.0kb upstream 2.0kb upstream 2000 false Bd2: 24734433-24736432 Brachypodium distachyon
Bradi2g26310 2.0kb downstream 2.0kb downstream 14334 true Bd2: 24720099-24734432 Brachypodium distachyon
Bradi2g26310 2.0kb downstream 2.0kb downstream 2000 false Bd2: 24720099-24722098 Brachypodium distachyon
Bradi2g26310 5.0kb upstream 5.0kb upstream 17334 true Bd2: 24722099-24739432 Brachypodium distachyon
Bradi2g26310 5.0kb upstream 5.0kb upstream 5000 false Bd2: 24734433-24739432 Brachypodium distachyon
Bradi2g26310 5.0kb downstream 5.0kb downstream 17334 true Bd2: 24717099-24734432 Brachypodium distachyon
Bradi2g26310 5.0kb downstream 5.0kb downstream 5000 false Bd2: 24717099-24722098 Brachypodium distachyon
Bradi2g26310 10.0kb upstream 10.0kb upstream 22334 true Bd2: 24722099-24744432 Brachypodium distachyon
Bradi2g26310 10.0kb upstream 10.0kb upstream 10000 false Bd2: 24734433-24744432 Brachypodium distachyon
Bradi2g26310 10.0kb downstream 10.0kb downstream 22334 true Bd2: 24712099-24734432 Brachypodium distachyon
Bradi2g26310 10.0kb downstream 10.0kb downstream 10000 false Bd2: 24712099-24722098 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577798 5269 Grass View MSA
122042778 5273 Angiosperm View MSA
121345832 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078     Low  
cufflinks 0.081     Low High
cufflinks 0.071     Low  
cufflinks 0.073     Low  
cufflinks 0.034     Low Low
cufflinks 0.063     Low  
cufflinks 0.068     Low  
cufflinks 0.057     Low  
cufflinks 0.066     Low  
cufflinks 0.052     Low  
cufflinks 0.068     Low  
cufflinks 0.06     Low  
cufflinks 0.056     Low  
cufflinks 0.059     Low  
cufflinks 0.051     Low  
cufflinks 0.07     Low  
cufflinks 0.063     Low  
cufflinks 0.065     Low  
cufflinks 0.049     Low  
cufflinks 0.022     Low Low
cufflinks 0.062     Low  
cufflinks 0.077     Low  
cufflinks 0.059     Low  
cufflinks 0.062     Low  
cufflinks 0.073     Low  
cufflinks 0.071     Low  
cufflinks 0.062     Low  
cufflinks 0.07     Low  
cufflinks 0.063     Low  
cufflinks 0.06     Low  

0 Strain