Gene : Bradi4g34990 B. distachyon v3.1
Defline:  (1 of 1) PTHR24193//PTHR24193:SF90 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4491
Name:  ? Bradi4g34990 Secondary Identifier:  ? PAC:32788122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g34990 0.5kb upstream 0.5kb upstream 4513 true Bd4: 40451763-40456275 Brachypodium distachyon
Bradi4g34990 0.5kb upstream 0.5kb upstream 500 false Bd4: 40451763-40452262 Brachypodium distachyon
Bradi4g34990 0.5kb downstream 0.5kb downstream 4513 true Bd4: 40452263-40456775 Brachypodium distachyon
Bradi4g34990 0.5kb downstream 0.5kb downstream 500 false Bd4: 40456276-40456775 Brachypodium distachyon
Bradi4g34990 1.0kb upstream 1.0kb upstream 5013 true Bd4: 40451263-40456275 Brachypodium distachyon
Bradi4g34990 1.0kb upstream 1.0kb upstream 1000 false Bd4: 40451263-40452262 Brachypodium distachyon
Bradi4g34990 1.0kb downstream 1.0kb downstream 5013 true Bd4: 40452263-40457275 Brachypodium distachyon
Bradi4g34990 1.0kb downstream 1.0kb downstream 1000 false Bd4: 40456276-40457275 Brachypodium distachyon
Bradi4g34990 2.0kb upstream 2.0kb upstream 6013 true Bd4: 40450263-40456275 Brachypodium distachyon
Bradi4g34990 2.0kb upstream 2.0kb upstream 2000 false Bd4: 40450263-40452262 Brachypodium distachyon
Bradi4g34990 2.0kb downstream 2.0kb downstream 6013 true Bd4: 40452263-40458275 Brachypodium distachyon
Bradi4g34990 2.0kb downstream 2.0kb downstream 2000 false Bd4: 40456276-40458275 Brachypodium distachyon
Bradi4g34990 5.0kb upstream 5.0kb upstream 9013 true Bd4: 40447263-40456275 Brachypodium distachyon
Bradi4g34990 5.0kb upstream 5.0kb upstream 5000 false Bd4: 40447263-40452262 Brachypodium distachyon
Bradi4g34990 5.0kb downstream 5.0kb downstream 9013 true Bd4: 40452263-40461275 Brachypodium distachyon
Bradi4g34990 5.0kb downstream 5.0kb downstream 5000 false Bd4: 40456276-40461275 Brachypodium distachyon
Bradi4g34990 10.0kb upstream 10.0kb upstream 14013 true Bd4: 40442263-40456275 Brachypodium distachyon
Bradi4g34990 10.0kb upstream 10.0kb upstream 10000 false Bd4: 40442263-40452262 Brachypodium distachyon
Bradi4g34990 10.0kb downstream 10.0kb downstream 14013 true Bd4: 40452263-40466275 Brachypodium distachyon
Bradi4g34990 10.0kb downstream 10.0kb downstream 10000 false Bd4: 40456276-40466275 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572964 5269 Grass View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.605        
cufflinks 3.35        
cufflinks 3.845        
cufflinks 3.351        
cufflinks 3.548        
cufflinks 3.203        
cufflinks 3.164        
cufflinks 2.789        
cufflinks 2.868        
cufflinks 2.628        
cufflinks 2.012       Low
cufflinks 2.859        
cufflinks 1.535       Low
cufflinks 1.594       Low
cufflinks 2.758        
cufflinks 3.048        
cufflinks 3.707        
cufflinks 5.665       High
cufflinks 3.548        
cufflinks 1.873       Low
cufflinks 4.378       High
cufflinks 3.153        
cufflinks 2.691        
cufflinks 2.933        
cufflinks 3.044        
cufflinks 3.464        
cufflinks 2.292        
cufflinks 3.503        
cufflinks 3.03        
cufflinks 4.766       High

0 Strain