Gene : Bradi2g26940 B. distachyon v3.1
Defline:  (1 of 1) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  3458
Name:  ? Bradi2g26940 Secondary Identifier:  ? PAC:32781930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g26940 0.5kb upstream 0.5kb upstream 4599 true Bd2: 25704148-25708746 Brachypodium distachyon
Bradi2g26940 0.5kb upstream 0.5kb upstream 500 false Bd2: 25704148-25704647 Brachypodium distachyon
Bradi2g26940 0.5kb downstream 0.5kb downstream 4599 true Bd2: 25704648-25709246 Brachypodium distachyon
Bradi2g26940 0.5kb downstream 0.5kb downstream 500 false Bd2: 25708747-25709246 Brachypodium distachyon
Bradi2g26940 1.0kb upstream 1.0kb upstream 5099 true Bd2: 25703648-25708746 Brachypodium distachyon
Bradi2g26940 1.0kb upstream 1.0kb upstream 1000 false Bd2: 25703648-25704647 Brachypodium distachyon
Bradi2g26940 1.0kb downstream 1.0kb downstream 5099 true Bd2: 25704648-25709746 Brachypodium distachyon
Bradi2g26940 1.0kb downstream 1.0kb downstream 1000 false Bd2: 25708747-25709746 Brachypodium distachyon
Bradi2g26940 2.0kb upstream 2.0kb upstream 6099 true Bd2: 25702648-25708746 Brachypodium distachyon
Bradi2g26940 2.0kb upstream 2.0kb upstream 2000 false Bd2: 25702648-25704647 Brachypodium distachyon
Bradi2g26940 2.0kb downstream 2.0kb downstream 6099 true Bd2: 25704648-25710746 Brachypodium distachyon
Bradi2g26940 2.0kb downstream 2.0kb downstream 2000 false Bd2: 25708747-25710746 Brachypodium distachyon
Bradi2g26940 5.0kb upstream 5.0kb upstream 9099 true Bd2: 25699648-25708746 Brachypodium distachyon
Bradi2g26940 5.0kb upstream 5.0kb upstream 5000 false Bd2: 25699648-25704647 Brachypodium distachyon
Bradi2g26940 5.0kb downstream 5.0kb downstream 9099 true Bd2: 25704648-25713746 Brachypodium distachyon
Bradi2g26940 5.0kb downstream 5.0kb downstream 5000 false Bd2: 25708747-25713746 Brachypodium distachyon
Bradi2g26940 10.0kb upstream 10.0kb upstream 14099 true Bd2: 25694648-25708746 Brachypodium distachyon
Bradi2g26940 10.0kb upstream 10.0kb upstream 10000 false Bd2: 25694648-25704647 Brachypodium distachyon
Bradi2g26940 10.0kb downstream 10.0kb downstream 14099 true Bd2: 25704648-25718746 Brachypodium distachyon
Bradi2g26940 10.0kb downstream 10.0kb downstream 10000 false Bd2: 25708747-25718746 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571903 5269 Grass View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 135.454     High  
cufflinks 117.019     High  
cufflinks 114.251     High  
cufflinks 121.977     High  
cufflinks 115.456     High  
cufflinks 100.161     High  
cufflinks 107.141     High  
cufflinks 105.914     High  
cufflinks 90.646     High  
cufflinks 124.276     High  
cufflinks 120.376     High  
cufflinks 103.95     High  
cufflinks 90.262     High  
cufflinks 108.427     High  
cufflinks 107.822     High  
cufflinks 129.55     High  
cufflinks 133.946     High  
cufflinks 11.23       Low
cufflinks 102.37     High  
cufflinks 65.648     High  
cufflinks 68.815     High  
cufflinks 123.588     High  
cufflinks 103.549     High  
cufflinks 99.836     High  
cufflinks 111.701     High  
cufflinks 127.519     High  
cufflinks 63.387     High  
cufflinks 118.28     High  
cufflinks 121.924     High  
cufflinks 92.729     High  

0 Strain