Gene : Bradi2g27090 B. distachyon v3.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF30 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3479
Name:  ? Bradi2g27090 Secondary Identifier:  ? PAC:32780484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g27090 0.5kb upstream 0.5kb upstream 3536 true Bd2: 25836353-25839888 Brachypodium distachyon
Bradi2g27090 0.5kb upstream 0.5kb upstream 500 false Bd2: 25836353-25836852 Brachypodium distachyon
Bradi2g27090 0.5kb downstream 0.5kb downstream 3536 true Bd2: 25836853-25840388 Brachypodium distachyon
Bradi2g27090 0.5kb downstream 0.5kb downstream 500 false Bd2: 25839889-25840388 Brachypodium distachyon
Bradi2g27090 1.0kb upstream 1.0kb upstream 4036 true Bd2: 25835853-25839888 Brachypodium distachyon
Bradi2g27090 1.0kb upstream 1.0kb upstream 1000 false Bd2: 25835853-25836852 Brachypodium distachyon
Bradi2g27090 1.0kb downstream 1.0kb downstream 4036 true Bd2: 25836853-25840888 Brachypodium distachyon
Bradi2g27090 1.0kb downstream 1.0kb downstream 1000 false Bd2: 25839889-25840888 Brachypodium distachyon
Bradi2g27090 2.0kb upstream 2.0kb upstream 5036 true Bd2: 25834853-25839888 Brachypodium distachyon
Bradi2g27090 2.0kb upstream 2.0kb upstream 2000 false Bd2: 25834853-25836852 Brachypodium distachyon
Bradi2g27090 2.0kb downstream 2.0kb downstream 5036 true Bd2: 25836853-25841888 Brachypodium distachyon
Bradi2g27090 2.0kb downstream 2.0kb downstream 2000 false Bd2: 25839889-25841888 Brachypodium distachyon
Bradi2g27090 5.0kb upstream 5.0kb upstream 8036 true Bd2: 25831853-25839888 Brachypodium distachyon
Bradi2g27090 5.0kb upstream 5.0kb upstream 5000 false Bd2: 25831853-25836852 Brachypodium distachyon
Bradi2g27090 5.0kb downstream 5.0kb downstream 8036 true Bd2: 25836853-25844888 Brachypodium distachyon
Bradi2g27090 5.0kb downstream 5.0kb downstream 5000 false Bd2: 25839889-25844888 Brachypodium distachyon
Bradi2g27090 10.0kb upstream 10.0kb upstream 13036 true Bd2: 25826853-25839888 Brachypodium distachyon
Bradi2g27090 10.0kb upstream 10.0kb upstream 10000 false Bd2: 25826853-25836852 Brachypodium distachyon
Bradi2g27090 10.0kb downstream 10.0kb downstream 13036 true Bd2: 25836853-25849888 Brachypodium distachyon
Bradi2g27090 10.0kb downstream 10.0kb downstream 10000 false Bd2: 25839889-25849888 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589265 5269 Grass View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.534     High  
cufflinks 14.513     High  
cufflinks 12.915     High  
cufflinks 17.2     High  
cufflinks 9.308     High  
cufflinks 11.805     High  
cufflinks 13.927     High  
cufflinks 9.931     High  
cufflinks 10.136     High  
cufflinks 15.3     High  
cufflinks 5.328       Low
cufflinks 8.839        
cufflinks 5.151       Low
cufflinks 6.775       Low
cufflinks 12.413     High  
cufflinks 11.257     High  
cufflinks 15.17     High  
cufflinks 15.219     High  
cufflinks 14.873     High  
cufflinks 13.4     High  
cufflinks 21.091     High High
cufflinks 8.383       Low
cufflinks 9.563     High  
cufflinks 9.732     High  
cufflinks 14.558     High  
cufflinks 15.079     High  
cufflinks 8.125       Low
cufflinks 15.882     High  
cufflinks 12.505     High  
cufflinks 16.589     High  

0 Strain