Gene : Bradi4g35156 B. distachyon v3.1
Defline:  (1 of 1) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  4512
Name:  ? Bradi4g35156 Secondary Identifier:  ? PAC:32790245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g35156 0.5kb upstream 0.5kb upstream 3211 true Bd4: 40563864-40567074 Brachypodium distachyon
Bradi4g35156 0.5kb upstream 0.5kb upstream 500 false Bd4: 40566575-40567074 Brachypodium distachyon
Bradi4g35156 0.5kb downstream 0.5kb downstream 3211 true Bd4: 40563364-40566574 Brachypodium distachyon
Bradi4g35156 0.5kb downstream 0.5kb downstream 500 false Bd4: 40563364-40563863 Brachypodium distachyon
Bradi4g35156 1.0kb upstream 1.0kb upstream 3711 true Bd4: 40563864-40567574 Brachypodium distachyon
Bradi4g35156 1.0kb upstream 1.0kb upstream 1000 false Bd4: 40566575-40567574 Brachypodium distachyon
Bradi4g35156 1.0kb downstream 1.0kb downstream 3711 true Bd4: 40562864-40566574 Brachypodium distachyon
Bradi4g35156 1.0kb downstream 1.0kb downstream 1000 false Bd4: 40562864-40563863 Brachypodium distachyon
Bradi4g35156 2.0kb upstream 2.0kb upstream 4711 true Bd4: 40563864-40568574 Brachypodium distachyon
Bradi4g35156 2.0kb upstream 2.0kb upstream 2000 false Bd4: 40566575-40568574 Brachypodium distachyon
Bradi4g35156 2.0kb downstream 2.0kb downstream 4711 true Bd4: 40561864-40566574 Brachypodium distachyon
Bradi4g35156 2.0kb downstream 2.0kb downstream 2000 false Bd4: 40561864-40563863 Brachypodium distachyon
Bradi4g35156 5.0kb upstream 5.0kb upstream 7711 true Bd4: 40563864-40571574 Brachypodium distachyon
Bradi4g35156 5.0kb upstream 5.0kb upstream 5000 false Bd4: 40566575-40571574 Brachypodium distachyon
Bradi4g35156 5.0kb downstream 5.0kb downstream 7711 true Bd4: 40558864-40566574 Brachypodium distachyon
Bradi4g35156 5.0kb downstream 5.0kb downstream 5000 false Bd4: 40558864-40563863 Brachypodium distachyon
Bradi4g35156 10.0kb upstream 10.0kb upstream 12711 true Bd4: 40563864-40576574 Brachypodium distachyon
Bradi4g35156 10.0kb upstream 10.0kb upstream 10000 false Bd4: 40566575-40576574 Brachypodium distachyon
Bradi4g35156 10.0kb downstream 10.0kb downstream 12711 true Bd4: 40553864-40566574 Brachypodium distachyon
Bradi4g35156 10.0kb downstream 10.0kb downstream 10000 false Bd4: 40553864-40563863 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580646 5269 Grass View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.457     High  
cufflinks 45.892     High  
cufflinks 46.067     High  
cufflinks 49.575     High  
cufflinks 65.752     High  
cufflinks 42.607     High  
cufflinks 44.266     High  
cufflinks 46.446     High  
cufflinks 41.193     High  
cufflinks 52.552     High  
cufflinks 33.433     High Low
cufflinks 45.002     High  
cufflinks 30.612     High Low
cufflinks 32.429     High Low
cufflinks 50.179     High  
cufflinks 46.158     High  
cufflinks 72.587     High High
cufflinks 86.587     High High
cufflinks 75.211     High High
cufflinks 82.785     High High
cufflinks 69.353     High High
cufflinks 45.284     High  
cufflinks 42.697     High  
cufflinks 42.668     High  
cufflinks 44.334     High  
cufflinks 52.879     High  
cufflinks 35.571     High Low
cufflinks 48.521     High  
cufflinks 44.741     High  
cufflinks 59.434     High  

0 Strain