Gene : Bradi2g27330 B. distachyon v3.1
Defline:  (1 of 328) PF00646 - F-box domain (F-box) Genomic Order:  3515
Name:  ? Bradi2g27330 Secondary Identifier:  ? PAC:32777116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g27330 0.5kb upstream 0.5kb upstream 5093 true Bd2: 26202120-26207212 Brachypodium distachyon
Bradi2g27330 0.5kb upstream 0.5kb upstream 500 false Bd2: 26206713-26207212 Brachypodium distachyon
Bradi2g27330 0.5kb downstream 0.5kb downstream 5093 true Bd2: 26201620-26206712 Brachypodium distachyon
Bradi2g27330 0.5kb downstream 0.5kb downstream 500 false Bd2: 26201620-26202119 Brachypodium distachyon
Bradi2g27330 1.0kb upstream 1.0kb upstream 5593 true Bd2: 26202120-26207712 Brachypodium distachyon
Bradi2g27330 1.0kb upstream 1.0kb upstream 1000 false Bd2: 26206713-26207712 Brachypodium distachyon
Bradi2g27330 1.0kb downstream 1.0kb downstream 5593 true Bd2: 26201120-26206712 Brachypodium distachyon
Bradi2g27330 1.0kb downstream 1.0kb downstream 1000 false Bd2: 26201120-26202119 Brachypodium distachyon
Bradi2g27330 2.0kb upstream 2.0kb upstream 6593 true Bd2: 26202120-26208712 Brachypodium distachyon
Bradi2g27330 2.0kb upstream 2.0kb upstream 2000 false Bd2: 26206713-26208712 Brachypodium distachyon
Bradi2g27330 2.0kb downstream 2.0kb downstream 6593 true Bd2: 26200120-26206712 Brachypodium distachyon
Bradi2g27330 2.0kb downstream 2.0kb downstream 2000 false Bd2: 26200120-26202119 Brachypodium distachyon
Bradi2g27330 5.0kb upstream 5.0kb upstream 9593 true Bd2: 26202120-26211712 Brachypodium distachyon
Bradi2g27330 5.0kb upstream 5.0kb upstream 5000 false Bd2: 26206713-26211712 Brachypodium distachyon
Bradi2g27330 5.0kb downstream 5.0kb downstream 9593 true Bd2: 26197120-26206712 Brachypodium distachyon
Bradi2g27330 5.0kb downstream 5.0kb downstream 5000 false Bd2: 26197120-26202119 Brachypodium distachyon
Bradi2g27330 10.0kb upstream 10.0kb upstream 14593 true Bd2: 26202120-26216712 Brachypodium distachyon
Bradi2g27330 10.0kb upstream 10.0kb upstream 10000 false Bd2: 26206713-26216712 Brachypodium distachyon
Bradi2g27330 10.0kb downstream 10.0kb downstream 14593 true Bd2: 26192120-26206712 Brachypodium distachyon
Bradi2g27330 10.0kb downstream 10.0kb downstream 10000 false Bd2: 26192120-26202119 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588243 5269 Grass View MSA
122048178 5273 Angiosperm View MSA
121348461 5274 Embryophyte View MSA
123425833 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.451        
cufflinks 1.301        
cufflinks 1.159        
cufflinks 1.894        
cufflinks 2.585        
cufflinks 1.315        
cufflinks 1.288        
cufflinks 0.847       Low
cufflinks 1.135        
cufflinks 2.784        
cufflinks 0.973       Low
cufflinks 0.976       Low
cufflinks 1.76        
cufflinks 0.875       Low
cufflinks 1.681        
cufflinks 1.062        
cufflinks 1.752        
cufflinks 2.314        
cufflinks 2.77        
cufflinks 19.23     High High
cufflinks 3.194        
cufflinks 1.272        
cufflinks 1.041        
cufflinks 1.12        
cufflinks 1.366        
cufflinks 2.21        
cufflinks 1.474        
cufflinks 1.913        
cufflinks 1.504        
cufflinks 1.884        

0 Strain