Gene : Bradi2g27840 B. distachyon v3.1
Defline:  (1 of 5) PTHR13166 - PROTEIN C6ORF149 Genomic Order:  3564
Name:  ? Bradi2g27840 Secondary Identifier:  ? PAC:32776370
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g27840 0.5kb upstream 0.5kb upstream 4411 true Bd2: 26719803-26724213 Brachypodium distachyon
Bradi2g27840 0.5kb upstream 0.5kb upstream 500 false Bd2: 26719803-26720302 Brachypodium distachyon
Bradi2g27840 0.5kb downstream 0.5kb downstream 4411 true Bd2: 26720303-26724713 Brachypodium distachyon
Bradi2g27840 0.5kb downstream 0.5kb downstream 500 false Bd2: 26724214-26724713 Brachypodium distachyon
Bradi2g27840 1.0kb upstream 1.0kb upstream 4911 true Bd2: 26719303-26724213 Brachypodium distachyon
Bradi2g27840 1.0kb upstream 1.0kb upstream 1000 false Bd2: 26719303-26720302 Brachypodium distachyon
Bradi2g27840 1.0kb downstream 1.0kb downstream 4911 true Bd2: 26720303-26725213 Brachypodium distachyon
Bradi2g27840 1.0kb downstream 1.0kb downstream 1000 false Bd2: 26724214-26725213 Brachypodium distachyon
Bradi2g27840 2.0kb upstream 2.0kb upstream 5911 true Bd2: 26718303-26724213 Brachypodium distachyon
Bradi2g27840 2.0kb upstream 2.0kb upstream 2000 false Bd2: 26718303-26720302 Brachypodium distachyon
Bradi2g27840 2.0kb downstream 2.0kb downstream 5911 true Bd2: 26720303-26726213 Brachypodium distachyon
Bradi2g27840 2.0kb downstream 2.0kb downstream 2000 false Bd2: 26724214-26726213 Brachypodium distachyon
Bradi2g27840 5.0kb upstream 5.0kb upstream 8911 true Bd2: 26715303-26724213 Brachypodium distachyon
Bradi2g27840 5.0kb upstream 5.0kb upstream 5000 false Bd2: 26715303-26720302 Brachypodium distachyon
Bradi2g27840 5.0kb downstream 5.0kb downstream 8911 true Bd2: 26720303-26729213 Brachypodium distachyon
Bradi2g27840 5.0kb downstream 5.0kb downstream 5000 false Bd2: 26724214-26729213 Brachypodium distachyon
Bradi2g27840 10.0kb upstream 10.0kb upstream 13911 true Bd2: 26710303-26724213 Brachypodium distachyon
Bradi2g27840 10.0kb upstream 10.0kb upstream 10000 false Bd2: 26710303-26720302 Brachypodium distachyon
Bradi2g27840 10.0kb downstream 10.0kb downstream 13911 true Bd2: 26720303-26734213 Brachypodium distachyon
Bradi2g27840 10.0kb downstream 10.0kb downstream 10000 false Bd2: 26724214-26734213 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576305 5269 Grass View MSA
122044477 5273 Angiosperm View MSA
121344831 5274 Embryophyte View MSA
123426412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.745        
cufflinks 4.168        
cufflinks 3.872        
cufflinks 6.888       High
cufflinks 3.589        
cufflinks 3.419        
cufflinks 4.503        
cufflinks 3.334        
cufflinks 3.592        
cufflinks 6.954       High
cufflinks 1.868       Low
cufflinks 2.549        
cufflinks 1.558       Low
cufflinks 2.404       Low
cufflinks 2.704        
cufflinks 2.978        
cufflinks 5.992        
cufflinks 6.593        
cufflinks 7.448       High
cufflinks 3.573        
cufflinks 9.722       High
cufflinks 3.254        
cufflinks 3.559        
cufflinks 3.801        
cufflinks 4.748        
cufflinks 6.328        
cufflinks 2.795        
cufflinks 5.818        
cufflinks 5.342        
cufflinks 5.251        

0 Strain