Gene : Bradi2g28120 B. distachyon v3.1
Defline:  (1 of 1) PTHR24089//PTHR24089:SF393 - FAMILY NOT NAMED // NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC Genomic Order:  3613
Name:  ? Bradi2g28120 Secondary Identifier:  ? PAC:32778787
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g28120 0.5kb upstream 0.5kb upstream 6661 true Bd2: 27360853-27367513 Brachypodium distachyon
Bradi2g28120 0.5kb upstream 0.5kb upstream 500 false Bd2: 27360853-27361352 Brachypodium distachyon
Bradi2g28120 0.5kb downstream 0.5kb downstream 6661 true Bd2: 27361353-27368013 Brachypodium distachyon
Bradi2g28120 0.5kb downstream 0.5kb downstream 500 false Bd2: 27367514-27368013 Brachypodium distachyon
Bradi2g28120 1.0kb upstream 1.0kb upstream 7161 true Bd2: 27360353-27367513 Brachypodium distachyon
Bradi2g28120 1.0kb upstream 1.0kb upstream 1000 false Bd2: 27360353-27361352 Brachypodium distachyon
Bradi2g28120 1.0kb downstream 1.0kb downstream 7161 true Bd2: 27361353-27368513 Brachypodium distachyon
Bradi2g28120 1.0kb downstream 1.0kb downstream 1000 false Bd2: 27367514-27368513 Brachypodium distachyon
Bradi2g28120 2.0kb upstream 2.0kb upstream 8161 true Bd2: 27359353-27367513 Brachypodium distachyon
Bradi2g28120 2.0kb upstream 2.0kb upstream 2000 false Bd2: 27359353-27361352 Brachypodium distachyon
Bradi2g28120 2.0kb downstream 2.0kb downstream 8161 true Bd2: 27361353-27369513 Brachypodium distachyon
Bradi2g28120 2.0kb downstream 2.0kb downstream 2000 false Bd2: 27367514-27369513 Brachypodium distachyon
Bradi2g28120 5.0kb upstream 5.0kb upstream 11161 true Bd2: 27356353-27367513 Brachypodium distachyon
Bradi2g28120 5.0kb upstream 5.0kb upstream 5000 false Bd2: 27356353-27361352 Brachypodium distachyon
Bradi2g28120 5.0kb downstream 5.0kb downstream 11161 true Bd2: 27361353-27372513 Brachypodium distachyon
Bradi2g28120 5.0kb downstream 5.0kb downstream 5000 false Bd2: 27367514-27372513 Brachypodium distachyon
Bradi2g28120 10.0kb upstream 10.0kb upstream 16161 true Bd2: 27351353-27367513 Brachypodium distachyon
Bradi2g28120 10.0kb upstream 10.0kb upstream 10000 false Bd2: 27351353-27361352 Brachypodium distachyon
Bradi2g28120 10.0kb downstream 10.0kb downstream 16161 true Bd2: 27361353-27377513 Brachypodium distachyon
Bradi2g28120 10.0kb downstream 10.0kb downstream 10000 false Bd2: 27367514-27377513 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577657 5269 Grass View MSA
122049488 5273 Angiosperm View MSA
121343929 5274 Embryophyte View MSA
123425611 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.225     High  
cufflinks 7.842        
cufflinks 10.788     High  
cufflinks 7.431       Low
cufflinks 9.153     High  
cufflinks 8.11        
cufflinks 7.703        
cufflinks 10.005     High  
cufflinks 7.969        
cufflinks 14.283     High High
cufflinks 11.875     High  
cufflinks 9.305     High  
cufflinks 14.512     High High
cufflinks 9.235     High  
cufflinks 15.046     High High
cufflinks 9.616     High  
cufflinks 11.057     High  
cufflinks 7.439       Low
cufflinks 12.254        
cufflinks 14.723     High High
cufflinks 6.349       Low
cufflinks 12.379     High  
cufflinks 10.153     High  
cufflinks 8.542        
cufflinks 7.565       Low
cufflinks 12.402     High  
cufflinks 11.135     High  
cufflinks 12.746     High  
cufflinks 11.961     High  
cufflinks 5.703       Low

0 Strain