Gene : Bradi2g28100 B. distachyon v3.1
Defline:  (1 of 1) PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Genomic Order:  3609
Name:  ? Bradi2g28100 Secondary Identifier:  ? PAC:32775517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g28100 0.5kb upstream 0.5kb upstream 5739 true Bd2: 27296486-27302224 Brachypodium distachyon
Bradi2g28100 0.5kb upstream 0.5kb upstream 500 false Bd2: 27301725-27302224 Brachypodium distachyon
Bradi2g28100 0.5kb downstream 0.5kb downstream 5739 true Bd2: 27295986-27301724 Brachypodium distachyon
Bradi2g28100 0.5kb downstream 0.5kb downstream 500 false Bd2: 27295986-27296485 Brachypodium distachyon
Bradi2g28100 1.0kb upstream 1.0kb upstream 6239 true Bd2: 27296486-27302724 Brachypodium distachyon
Bradi2g28100 1.0kb upstream 1.0kb upstream 1000 false Bd2: 27301725-27302724 Brachypodium distachyon
Bradi2g28100 1.0kb downstream 1.0kb downstream 6239 true Bd2: 27295486-27301724 Brachypodium distachyon
Bradi2g28100 1.0kb downstream 1.0kb downstream 1000 false Bd2: 27295486-27296485 Brachypodium distachyon
Bradi2g28100 2.0kb upstream 2.0kb upstream 7239 true Bd2: 27296486-27303724 Brachypodium distachyon
Bradi2g28100 2.0kb upstream 2.0kb upstream 2000 false Bd2: 27301725-27303724 Brachypodium distachyon
Bradi2g28100 2.0kb downstream 2.0kb downstream 7239 true Bd2: 27294486-27301724 Brachypodium distachyon
Bradi2g28100 2.0kb downstream 2.0kb downstream 2000 false Bd2: 27294486-27296485 Brachypodium distachyon
Bradi2g28100 5.0kb upstream 5.0kb upstream 10239 true Bd2: 27296486-27306724 Brachypodium distachyon
Bradi2g28100 5.0kb upstream 5.0kb upstream 5000 false Bd2: 27301725-27306724 Brachypodium distachyon
Bradi2g28100 5.0kb downstream 5.0kb downstream 10239 true Bd2: 27291486-27301724 Brachypodium distachyon
Bradi2g28100 5.0kb downstream 5.0kb downstream 5000 false Bd2: 27291486-27296485 Brachypodium distachyon
Bradi2g28100 10.0kb upstream 10.0kb upstream 15239 true Bd2: 27296486-27311724 Brachypodium distachyon
Bradi2g28100 10.0kb upstream 10.0kb upstream 10000 false Bd2: 27301725-27311724 Brachypodium distachyon
Bradi2g28100 10.0kb downstream 10.0kb downstream 15239 true Bd2: 27286486-27301724 Brachypodium distachyon
Bradi2g28100 10.0kb downstream 10.0kb downstream 10000 false Bd2: 27286486-27296485 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571378 5269 Grass View MSA
122044397 5273 Angiosperm View MSA
121310289 5274 Embryophyte View MSA
123347816 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116        
cufflinks 0.136        
cufflinks 0.165        
cufflinks 0.097     Low  
cufflinks 0.051     Low  
cufflinks 0.1        
cufflinks 0.227        
cufflinks 0.149        
cufflinks 0.223        
cufflinks 0.172        
cufflinks 0.002     Low Low
cufflinks 0.108        
cufflinks 0.022     Low  
cufflinks 0.004     Low Low
cufflinks 0.04     Low  
cufflinks 0.128        
cufflinks 0.083     Low  
cufflinks 1.817       High
cufflinks 0.096     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.759       High
cufflinks 0.132        
cufflinks 0.107        
cufflinks 0.118        
cufflinks 0.136        
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.173        
cufflinks 0.109     Low  
cufflinks 0.822       High

0 Strain