Gene : Bradi2g28254 B. distachyon v3.1
Defline:  (1 of 7) PF01439 - Metallothionein (Metallothio_2) Genomic Order:  3626
Name:  ? Bradi2g28254 Secondary Identifier:  ? PAC:32771102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g28254 0.5kb upstream 0.5kb upstream 1171 true Bd2: 27485731-27486901 Brachypodium distachyon
Bradi2g28254 0.5kb upstream 0.5kb upstream 500 false Bd2: 27486402-27486901 Brachypodium distachyon
Bradi2g28254 0.5kb downstream 0.5kb downstream 1171 true Bd2: 27485231-27486401 Brachypodium distachyon
Bradi2g28254 0.5kb downstream 0.5kb downstream 500 false Bd2: 27485231-27485730 Brachypodium distachyon
Bradi2g28254 1.0kb upstream 1.0kb upstream 1671 true Bd2: 27485731-27487401 Brachypodium distachyon
Bradi2g28254 1.0kb upstream 1.0kb upstream 1000 false Bd2: 27486402-27487401 Brachypodium distachyon
Bradi2g28254 1.0kb downstream 1.0kb downstream 1671 true Bd2: 27484731-27486401 Brachypodium distachyon
Bradi2g28254 1.0kb downstream 1.0kb downstream 1000 false Bd2: 27484731-27485730 Brachypodium distachyon
Bradi2g28254 2.0kb upstream 2.0kb upstream 2671 true Bd2: 27485731-27488401 Brachypodium distachyon
Bradi2g28254 2.0kb upstream 2.0kb upstream 2000 false Bd2: 27486402-27488401 Brachypodium distachyon
Bradi2g28254 2.0kb downstream 2.0kb downstream 2671 true Bd2: 27483731-27486401 Brachypodium distachyon
Bradi2g28254 2.0kb downstream 2.0kb downstream 2000 false Bd2: 27483731-27485730 Brachypodium distachyon
Bradi2g28254 5.0kb upstream 5.0kb upstream 5671 true Bd2: 27485731-27491401 Brachypodium distachyon
Bradi2g28254 5.0kb upstream 5.0kb upstream 5000 false Bd2: 27486402-27491401 Brachypodium distachyon
Bradi2g28254 5.0kb downstream 5.0kb downstream 5671 true Bd2: 27480731-27486401 Brachypodium distachyon
Bradi2g28254 5.0kb downstream 5.0kb downstream 5000 false Bd2: 27480731-27485730 Brachypodium distachyon
Bradi2g28254 10.0kb upstream 10.0kb upstream 10671 true Bd2: 27485731-27496401 Brachypodium distachyon
Bradi2g28254 10.0kb upstream 10.0kb upstream 10000 false Bd2: 27486402-27496401 Brachypodium distachyon
Bradi2g28254 10.0kb downstream 10.0kb downstream 10671 true Bd2: 27475731-27486401 Brachypodium distachyon
Bradi2g28254 10.0kb downstream 10.0kb downstream 10000 false Bd2: 27475731-27485730 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590261 5269 Grass View MSA
122044110 5273 Angiosperm View MSA
121310239 5274 Embryophyte View MSA
123347784 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.837     High  
cufflinks 12.365     High  
cufflinks 18.787     High  
cufflinks 22.238     High  
cufflinks 18.195     High  
cufflinks 8.722        
cufflinks 12.64     High  
cufflinks 6.914        
cufflinks 6.984        
cufflinks 22.65     High  
cufflinks 4.444       Low
cufflinks 8.542        
cufflinks 15.445     High  
cufflinks 3.619       Low
cufflinks 25.287     High  
cufflinks 4.566       Low
cufflinks 17.63     High  
cufflinks 797.091     High High
cufflinks 43.825     High  
cufflinks 59.993     High  
cufflinks 23.288     High  
cufflinks 7.261        
cufflinks 9.635     High  
cufflinks 8.037        
cufflinks 10.266     High  
cufflinks 23.789     High  
cufflinks 9.492     High  
cufflinks 22.833     High  
cufflinks 12.655     High  
cufflinks 49.152     High  

0 Strain