Gene : Bradi2g23710 B. distachyon v3.1
Defline:  (1 of 5) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  3011
Name:  ? Bradi2g23710 Secondary Identifier:  ? PAC:32777796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23710 0.5kb upstream 0.5kb upstream 2621 true Bd2: 21397954-21400574 Brachypodium distachyon
Bradi2g23710 0.5kb upstream 0.5kb upstream 500 false Bd2: 21397954-21398453 Brachypodium distachyon
Bradi2g23710 0.5kb downstream 0.5kb downstream 2621 true Bd2: 21398454-21401074 Brachypodium distachyon
Bradi2g23710 0.5kb downstream 0.5kb downstream 500 false Bd2: 21400575-21401074 Brachypodium distachyon
Bradi2g23710 1.0kb upstream 1.0kb upstream 3121 true Bd2: 21397454-21400574 Brachypodium distachyon
Bradi2g23710 1.0kb upstream 1.0kb upstream 1000 false Bd2: 21397454-21398453 Brachypodium distachyon
Bradi2g23710 1.0kb downstream 1.0kb downstream 3121 true Bd2: 21398454-21401574 Brachypodium distachyon
Bradi2g23710 1.0kb downstream 1.0kb downstream 1000 false Bd2: 21400575-21401574 Brachypodium distachyon
Bradi2g23710 2.0kb upstream 2.0kb upstream 4121 true Bd2: 21396454-21400574 Brachypodium distachyon
Bradi2g23710 2.0kb upstream 2.0kb upstream 2000 false Bd2: 21396454-21398453 Brachypodium distachyon
Bradi2g23710 2.0kb downstream 2.0kb downstream 4121 true Bd2: 21398454-21402574 Brachypodium distachyon
Bradi2g23710 2.0kb downstream 2.0kb downstream 2000 false Bd2: 21400575-21402574 Brachypodium distachyon
Bradi2g23710 5.0kb upstream 5.0kb upstream 7121 true Bd2: 21393454-21400574 Brachypodium distachyon
Bradi2g23710 5.0kb upstream 5.0kb upstream 5000 false Bd2: 21393454-21398453 Brachypodium distachyon
Bradi2g23710 5.0kb downstream 5.0kb downstream 7121 true Bd2: 21398454-21405574 Brachypodium distachyon
Bradi2g23710 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21400575-21405574 Brachypodium distachyon
Bradi2g23710 10.0kb upstream 10.0kb upstream 12121 true Bd2: 21388454-21400574 Brachypodium distachyon
Bradi2g23710 10.0kb upstream 10.0kb upstream 10000 false Bd2: 21388454-21398453 Brachypodium distachyon
Bradi2g23710 10.0kb downstream 10.0kb downstream 12121 true Bd2: 21398454-21410574 Brachypodium distachyon
Bradi2g23710 10.0kb downstream 10.0kb downstream 10000 false Bd2: 21400575-21410574 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577173 5269 Grass View MSA
122047094 5273 Angiosperm View MSA
121310689 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.792        
cufflinks 5.571        
cufflinks 4.443        
cufflinks 5.382        
cufflinks 2.129        
cufflinks 4.807        
cufflinks 5.22        
cufflinks 8.853       High
cufflinks 6.167        
cufflinks 3.798        
cufflinks 1.003       Low
cufflinks 4.506        
cufflinks 1.577       Low
cufflinks 1.157       Low
cufflinks 6.214        
cufflinks 4.805        
cufflinks 4.651        
cufflinks 2.722        
cufflinks 3.982        
cufflinks 0.666       Low
cufflinks 9.063       High
cufflinks 4.949        
cufflinks 6.78       High
cufflinks 5.279        
cufflinks 4.006        
cufflinks 3.271        
cufflinks 1.627       Low
cufflinks 4.2        
cufflinks 5.527        
cufflinks 7.349       High

0 Strain