Gene : Bradi2g23780 B. distachyon v3.1
Defline:  (1 of 1) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase Genomic Order:  3020
Name:  ? Bradi2g23780 Secondary Identifier:  ? PAC:32782147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23780 0.5kb upstream 0.5kb upstream 5057 true Bd2: 21521927-21526983 Brachypodium distachyon
Bradi2g23780 0.5kb upstream 0.5kb upstream 500 false Bd2: 21521927-21522426 Brachypodium distachyon
Bradi2g23780 0.5kb downstream 0.5kb downstream 5057 true Bd2: 21522427-21527483 Brachypodium distachyon
Bradi2g23780 0.5kb downstream 0.5kb downstream 500 false Bd2: 21526984-21527483 Brachypodium distachyon
Bradi2g23780 1.0kb upstream 1.0kb upstream 5557 true Bd2: 21521427-21526983 Brachypodium distachyon
Bradi2g23780 1.0kb upstream 1.0kb upstream 1000 false Bd2: 21521427-21522426 Brachypodium distachyon
Bradi2g23780 1.0kb downstream 1.0kb downstream 5557 true Bd2: 21522427-21527983 Brachypodium distachyon
Bradi2g23780 1.0kb downstream 1.0kb downstream 1000 false Bd2: 21526984-21527983 Brachypodium distachyon
Bradi2g23780 2.0kb upstream 2.0kb upstream 6557 true Bd2: 21520427-21526983 Brachypodium distachyon
Bradi2g23780 2.0kb upstream 2.0kb upstream 2000 false Bd2: 21520427-21522426 Brachypodium distachyon
Bradi2g23780 2.0kb downstream 2.0kb downstream 6557 true Bd2: 21522427-21528983 Brachypodium distachyon
Bradi2g23780 2.0kb downstream 2.0kb downstream 2000 false Bd2: 21526984-21528983 Brachypodium distachyon
Bradi2g23780 5.0kb upstream 5.0kb upstream 9557 true Bd2: 21517427-21526983 Brachypodium distachyon
Bradi2g23780 5.0kb upstream 5.0kb upstream 5000 false Bd2: 21517427-21522426 Brachypodium distachyon
Bradi2g23780 5.0kb downstream 5.0kb downstream 9557 true Bd2: 21522427-21531983 Brachypodium distachyon
Bradi2g23780 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21526984-21531983 Brachypodium distachyon
Bradi2g23780 10.0kb upstream 10.0kb upstream 14557 true Bd2: 21512427-21526983 Brachypodium distachyon
Bradi2g23780 10.0kb upstream 10.0kb upstream 10000 false Bd2: 21512427-21522426 Brachypodium distachyon
Bradi2g23780 10.0kb downstream 10.0kb downstream 14557 true Bd2: 21522427-21536983 Brachypodium distachyon
Bradi2g23780 10.0kb downstream 10.0kb downstream 10000 false Bd2: 21526984-21536983 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579732 5269 Grass View MSA
122047143 5273 Angiosperm View MSA
123429164 5275 Viridiplantae View MSA
121348122 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.345        
cufflinks 2.465       Low
cufflinks 2.55       Low
cufflinks 3.222        
cufflinks 18.7     High High
cufflinks 2.885       Low
cufflinks 2.847       Low
cufflinks 6.622        
cufflinks 3.934        
cufflinks 4.116        
cufflinks 6.568        
cufflinks 5.396        
cufflinks 3.781        
cufflinks 4.798        
cufflinks 11.141     High High
cufflinks 3.063        
cufflinks 4.998        
cufflinks 2.803       Low
cufflinks 9.996       High
cufflinks 11.431     High High
cufflinks 6.331        
cufflinks 4.578        
cufflinks 8.918        
cufflinks 4.435        
cufflinks 3.425        
cufflinks 3.114        
cufflinks 4.573        
cufflinks 3.564        
cufflinks 4.521        
cufflinks 5.02        

0 Strain