Gene : Bradi2g23730 B. distachyon v3.1
Defline:  (1 of 3) K13463 - coronatine-insensitive protein 1 (COI-1) Genomic Order:  3014
Name:  ? Bradi2g23730 Secondary Identifier:  ? PAC:32777297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23730 0.5kb upstream 0.5kb upstream 3962 true Bd2: 21419791-21423752 Brachypodium distachyon
Bradi2g23730 0.5kb upstream 0.5kb upstream 500 false Bd2: 21423253-21423752 Brachypodium distachyon
Bradi2g23730 0.5kb downstream 0.5kb downstream 3962 true Bd2: 21419291-21423252 Brachypodium distachyon
Bradi2g23730 0.5kb downstream 0.5kb downstream 500 false Bd2: 21419291-21419790 Brachypodium distachyon
Bradi2g23730 1.0kb upstream 1.0kb upstream 4462 true Bd2: 21419791-21424252 Brachypodium distachyon
Bradi2g23730 1.0kb upstream 1.0kb upstream 1000 false Bd2: 21423253-21424252 Brachypodium distachyon
Bradi2g23730 1.0kb downstream 1.0kb downstream 4462 true Bd2: 21418791-21423252 Brachypodium distachyon
Bradi2g23730 1.0kb downstream 1.0kb downstream 1000 false Bd2: 21418791-21419790 Brachypodium distachyon
Bradi2g23730 2.0kb upstream 2.0kb upstream 5462 true Bd2: 21419791-21425252 Brachypodium distachyon
Bradi2g23730 2.0kb upstream 2.0kb upstream 2000 false Bd2: 21423253-21425252 Brachypodium distachyon
Bradi2g23730 2.0kb downstream 2.0kb downstream 5462 true Bd2: 21417791-21423252 Brachypodium distachyon
Bradi2g23730 2.0kb downstream 2.0kb downstream 2000 false Bd2: 21417791-21419790 Brachypodium distachyon
Bradi2g23730 5.0kb upstream 5.0kb upstream 8462 true Bd2: 21419791-21428252 Brachypodium distachyon
Bradi2g23730 5.0kb upstream 5.0kb upstream 5000 false Bd2: 21423253-21428252 Brachypodium distachyon
Bradi2g23730 5.0kb downstream 5.0kb downstream 8462 true Bd2: 21414791-21423252 Brachypodium distachyon
Bradi2g23730 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21414791-21419790 Brachypodium distachyon
Bradi2g23730 10.0kb upstream 10.0kb upstream 13462 true Bd2: 21419791-21433252 Brachypodium distachyon
Bradi2g23730 10.0kb upstream 10.0kb upstream 10000 false Bd2: 21423253-21433252 Brachypodium distachyon
Bradi2g23730 10.0kb downstream 10.0kb downstream 13462 true Bd2: 21409791-21423252 Brachypodium distachyon
Bradi2g23730 10.0kb downstream 10.0kb downstream 10000 false Bd2: 21409791-21419790 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586472 5269 Grass View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.839     High  
cufflinks 27.994     High  
cufflinks 30.685     High  
cufflinks 25.272     High  
cufflinks 17.31     High Low
cufflinks 29.9     High  
cufflinks 28.62     High  
cufflinks 28.308     High  
cufflinks 30.639     High  
cufflinks 28.22     High  
cufflinks 32.502     High  
cufflinks 29.551     High  
cufflinks 34.607     High  
cufflinks 33.067     High  
cufflinks 25.142     High  
cufflinks 27.158     High  
cufflinks 28.577     High  
cufflinks 36.885     High  
cufflinks 37.527     High High
cufflinks 11.16     High Low
cufflinks 43.97     High High
cufflinks 33.479     High  
cufflinks 29.661     High  
cufflinks 33.849     High  
cufflinks 28.088     High  
cufflinks 29.436     High  
cufflinks 38.855     High High
cufflinks 31.016     High  
cufflinks 29.814     High  
cufflinks 39.182     High High

0 Strain