Gene : Bradi2g23967 B. distachyon v3.1
Defline:  (1 of 1) PTHR31989:SF4 - NAC DOMAIN-CONTAINING PROTEIN 61-RELATED Genomic Order:  3047
Name:  ? Bradi2g23967 Secondary Identifier:  ? PAC:32772812
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23967 0.5kb upstream 0.5kb upstream 1841 true Bd2: 21716879-21718719 Brachypodium distachyon
Bradi2g23967 0.5kb upstream 0.5kb upstream 500 false Bd2: 21716879-21717378 Brachypodium distachyon
Bradi2g23967 0.5kb downstream 0.5kb downstream 1841 true Bd2: 21717379-21719219 Brachypodium distachyon
Bradi2g23967 0.5kb downstream 0.5kb downstream 500 false Bd2: 21718720-21719219 Brachypodium distachyon
Bradi2g23967 1.0kb upstream 1.0kb upstream 2341 true Bd2: 21716379-21718719 Brachypodium distachyon
Bradi2g23967 1.0kb upstream 1.0kb upstream 1000 false Bd2: 21716379-21717378 Brachypodium distachyon
Bradi2g23967 1.0kb downstream 1.0kb downstream 2341 true Bd2: 21717379-21719719 Brachypodium distachyon
Bradi2g23967 1.0kb downstream 1.0kb downstream 1000 false Bd2: 21718720-21719719 Brachypodium distachyon
Bradi2g23967 2.0kb upstream 2.0kb upstream 3341 true Bd2: 21715379-21718719 Brachypodium distachyon
Bradi2g23967 2.0kb upstream 2.0kb upstream 2000 false Bd2: 21715379-21717378 Brachypodium distachyon
Bradi2g23967 2.0kb downstream 2.0kb downstream 3341 true Bd2: 21717379-21720719 Brachypodium distachyon
Bradi2g23967 2.0kb downstream 2.0kb downstream 2000 false Bd2: 21718720-21720719 Brachypodium distachyon
Bradi2g23967 5.0kb upstream 5.0kb upstream 6341 true Bd2: 21712379-21718719 Brachypodium distachyon
Bradi2g23967 5.0kb upstream 5.0kb upstream 5000 false Bd2: 21712379-21717378 Brachypodium distachyon
Bradi2g23967 5.0kb downstream 5.0kb downstream 6341 true Bd2: 21717379-21723719 Brachypodium distachyon
Bradi2g23967 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21718720-21723719 Brachypodium distachyon
Bradi2g23967 10.0kb upstream 10.0kb upstream 11341 true Bd2: 21707379-21718719 Brachypodium distachyon
Bradi2g23967 10.0kb upstream 10.0kb upstream 10000 false Bd2: 21707379-21717378 Brachypodium distachyon
Bradi2g23967 10.0kb downstream 10.0kb downstream 11341 true Bd2: 21717379-21728719 Brachypodium distachyon
Bradi2g23967 10.0kb downstream 10.0kb downstream 10000 false Bd2: 21718720-21728719 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583181 5269 Grass View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257       High
cufflinks 0.035     Low  
cufflinks 0.01     Low Low
cufflinks 0.068     Low  
cufflinks 0.286       High
cufflinks 0.036     Low  
cufflinks 0.067     Low  
cufflinks 0.1        
cufflinks 0.038     Low  
cufflinks 0.055     Low  
cufflinks 0.099        
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.158        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146     Low  
cufflinks 0.253       High
cufflinks 0.05     Low  
cufflinks 0.076     Low  
cufflinks 0.205        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.059     Low  
cufflinks 0.033     Low  
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        

0 Strain