Gene : Bradi2g24670 B. distachyon v3.1
Defline:  (1 of 3) PTHR23421//PTHR23421:SF77 - BETA-GALACTOSIDASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  3116
Name:  ? Bradi2g24670 Secondary Identifier:  ? PAC:32772584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g24670 0.5kb upstream 0.5kb upstream 13106 true Bd2: 22460703-22473808 Brachypodium distachyon
Bradi2g24670 0.5kb upstream 0.5kb upstream 500 false Bd2: 22460703-22461202 Brachypodium distachyon
Bradi2g24670 0.5kb downstream 0.5kb downstream 13106 true Bd2: 22461203-22474308 Brachypodium distachyon
Bradi2g24670 0.5kb downstream 0.5kb downstream 500 false Bd2: 22473809-22474308 Brachypodium distachyon
Bradi2g24670 1.0kb upstream 1.0kb upstream 13606 true Bd2: 22460203-22473808 Brachypodium distachyon
Bradi2g24670 1.0kb upstream 1.0kb upstream 1000 false Bd2: 22460203-22461202 Brachypodium distachyon
Bradi2g24670 1.0kb downstream 1.0kb downstream 13606 true Bd2: 22461203-22474808 Brachypodium distachyon
Bradi2g24670 1.0kb downstream 1.0kb downstream 1000 false Bd2: 22473809-22474808 Brachypodium distachyon
Bradi2g24670 2.0kb upstream 2.0kb upstream 14606 true Bd2: 22459203-22473808 Brachypodium distachyon
Bradi2g24670 2.0kb upstream 2.0kb upstream 2000 false Bd2: 22459203-22461202 Brachypodium distachyon
Bradi2g24670 2.0kb downstream 2.0kb downstream 14606 true Bd2: 22461203-22475808 Brachypodium distachyon
Bradi2g24670 2.0kb downstream 2.0kb downstream 2000 false Bd2: 22473809-22475808 Brachypodium distachyon
Bradi2g24670 5.0kb upstream 5.0kb upstream 17606 true Bd2: 22456203-22473808 Brachypodium distachyon
Bradi2g24670 5.0kb upstream 5.0kb upstream 5000 false Bd2: 22456203-22461202 Brachypodium distachyon
Bradi2g24670 5.0kb downstream 5.0kb downstream 17606 true Bd2: 22461203-22478808 Brachypodium distachyon
Bradi2g24670 5.0kb downstream 5.0kb downstream 5000 false Bd2: 22473809-22478808 Brachypodium distachyon
Bradi2g24670 10.0kb upstream 10.0kb upstream 22606 true Bd2: 22451203-22473808 Brachypodium distachyon
Bradi2g24670 10.0kb upstream 10.0kb upstream 10000 false Bd2: 22451203-22461202 Brachypodium distachyon
Bradi2g24670 10.0kb downstream 10.0kb downstream 22606 true Bd2: 22461203-22483808 Brachypodium distachyon
Bradi2g24670 10.0kb downstream 10.0kb downstream 10000 false Bd2: 22473809-22483808 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584297 5269 Grass View MSA
122045958 5273 Angiosperm View MSA
121310530 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106        
cufflinks 0.115        
cufflinks 0.152        
cufflinks 0.066     Low  
cufflinks 0.069     Low  
cufflinks 0.089     Low  
cufflinks 0.093        
cufflinks 0.087        
cufflinks 0.084     Low  
cufflinks 0.165        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.15        
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.141        
cufflinks 0.157        
cufflinks 0.082     Low  
cufflinks 0.159        
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.141        
cufflinks 0.089        
cufflinks 0.126        
cufflinks 0.078     Low  
cufflinks 0.106     Low  
cufflinks 0.008     Low Low
cufflinks 0.12        
cufflinks 0.128        
cufflinks 0.292       High

0 Strain