Gene : Bradi2g24700 B. distachyon v3.1
Defline:  (1 of 2) PTHR11214//PTHR11214:SF100 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  3120
Name:  ? Bradi2g24700 Secondary Identifier:  ? PAC:32772572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g24700 0.5kb upstream 0.5kb upstream 3764 true Bd2: 22494411-22498174 Brachypodium distachyon
Bradi2g24700 0.5kb upstream 0.5kb upstream 500 false Bd2: 22494411-22494910 Brachypodium distachyon
Bradi2g24700 0.5kb downstream 0.5kb downstream 3764 true Bd2: 22494911-22498674 Brachypodium distachyon
Bradi2g24700 0.5kb downstream 0.5kb downstream 500 false Bd2: 22498175-22498674 Brachypodium distachyon
Bradi2g24700 1.0kb upstream 1.0kb upstream 4264 true Bd2: 22493911-22498174 Brachypodium distachyon
Bradi2g24700 1.0kb upstream 1.0kb upstream 1000 false Bd2: 22493911-22494910 Brachypodium distachyon
Bradi2g24700 1.0kb downstream 1.0kb downstream 4264 true Bd2: 22494911-22499174 Brachypodium distachyon
Bradi2g24700 1.0kb downstream 1.0kb downstream 1000 false Bd2: 22498175-22499174 Brachypodium distachyon
Bradi2g24700 2.0kb upstream 2.0kb upstream 5264 true Bd2: 22492911-22498174 Brachypodium distachyon
Bradi2g24700 2.0kb upstream 2.0kb upstream 2000 false Bd2: 22492911-22494910 Brachypodium distachyon
Bradi2g24700 2.0kb downstream 2.0kb downstream 5264 true Bd2: 22494911-22500174 Brachypodium distachyon
Bradi2g24700 2.0kb downstream 2.0kb downstream 2000 false Bd2: 22498175-22500174 Brachypodium distachyon
Bradi2g24700 5.0kb upstream 5.0kb upstream 8264 true Bd2: 22489911-22498174 Brachypodium distachyon
Bradi2g24700 5.0kb upstream 5.0kb upstream 5000 false Bd2: 22489911-22494910 Brachypodium distachyon
Bradi2g24700 5.0kb downstream 5.0kb downstream 8264 true Bd2: 22494911-22503174 Brachypodium distachyon
Bradi2g24700 5.0kb downstream 5.0kb downstream 5000 false Bd2: 22498175-22503174 Brachypodium distachyon
Bradi2g24700 10.0kb upstream 10.0kb upstream 13264 true Bd2: 22484911-22498174 Brachypodium distachyon
Bradi2g24700 10.0kb upstream 10.0kb upstream 10000 false Bd2: 22484911-22494910 Brachypodium distachyon
Bradi2g24700 10.0kb downstream 10.0kb downstream 13264 true Bd2: 22494911-22508174 Brachypodium distachyon
Bradi2g24700 10.0kb downstream 10.0kb downstream 10000 false Bd2: 22498175-22508174 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577134 5269 Grass View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.74        
cufflinks 0.528        
cufflinks 0.829        
cufflinks 0.781        
cufflinks 3.805       High
cufflinks 0.569        
cufflinks 0.617        
cufflinks 0.895        
cufflinks 0.675        
cufflinks 1.939        
cufflinks 1.936        
cufflinks 0.54        
cufflinks 0.632        
cufflinks 0.597        
cufflinks 0.744        
cufflinks 0.415       Low
cufflinks 0.862        
cufflinks 0.451       Low
cufflinks 2.325       High
cufflinks 4.196       High
cufflinks 1.109        
cufflinks 1.059        
cufflinks 0.82        
cufflinks 0.601        
cufflinks 0.614        
cufflinks 1.254        
cufflinks 0.467       Low
cufflinks 1.323        
cufflinks 0.932        
cufflinks 0.438       Low

0 Strain