Gene : Bradi2g25097 B. distachyon v3.1
Defline:  (1 of 6) KOG4249 - Uncharacterized conserved protein Genomic Order:  3179
Name:  ? Bradi2g25097 Secondary Identifier:  ? PAC:32779888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25097 0.5kb upstream 0.5kb upstream 5453 true Bd2: 22942746-22948198 Brachypodium distachyon
Bradi2g25097 0.5kb upstream 0.5kb upstream 500 false Bd2: 22942746-22943245 Brachypodium distachyon
Bradi2g25097 0.5kb downstream 0.5kb downstream 5453 true Bd2: 22943246-22948698 Brachypodium distachyon
Bradi2g25097 0.5kb downstream 0.5kb downstream 500 false Bd2: 22948199-22948698 Brachypodium distachyon
Bradi2g25097 1.0kb upstream 1.0kb upstream 5953 true Bd2: 22942246-22948198 Brachypodium distachyon
Bradi2g25097 1.0kb upstream 1.0kb upstream 1000 false Bd2: 22942246-22943245 Brachypodium distachyon
Bradi2g25097 1.0kb downstream 1.0kb downstream 5953 true Bd2: 22943246-22949198 Brachypodium distachyon
Bradi2g25097 1.0kb downstream 1.0kb downstream 1000 false Bd2: 22948199-22949198 Brachypodium distachyon
Bradi2g25097 2.0kb upstream 2.0kb upstream 6953 true Bd2: 22941246-22948198 Brachypodium distachyon
Bradi2g25097 2.0kb upstream 2.0kb upstream 2000 false Bd2: 22941246-22943245 Brachypodium distachyon
Bradi2g25097 2.0kb downstream 2.0kb downstream 6953 true Bd2: 22943246-22950198 Brachypodium distachyon
Bradi2g25097 2.0kb downstream 2.0kb downstream 2000 false Bd2: 22948199-22950198 Brachypodium distachyon
Bradi2g25097 5.0kb upstream 5.0kb upstream 9953 true Bd2: 22938246-22948198 Brachypodium distachyon
Bradi2g25097 5.0kb upstream 5.0kb upstream 5000 false Bd2: 22938246-22943245 Brachypodium distachyon
Bradi2g25097 5.0kb downstream 5.0kb downstream 9953 true Bd2: 22943246-22953198 Brachypodium distachyon
Bradi2g25097 5.0kb downstream 5.0kb downstream 5000 false Bd2: 22948199-22953198 Brachypodium distachyon
Bradi2g25097 10.0kb upstream 10.0kb upstream 14953 true Bd2: 22933246-22948198 Brachypodium distachyon
Bradi2g25097 10.0kb upstream 10.0kb upstream 10000 false Bd2: 22933246-22943245 Brachypodium distachyon
Bradi2g25097 10.0kb downstream 10.0kb downstream 14953 true Bd2: 22943246-22958198 Brachypodium distachyon
Bradi2g25097 10.0kb downstream 10.0kb downstream 10000 false Bd2: 22948199-22958198 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588471 5269 Grass View MSA
122042067 5273 Angiosperm View MSA
121346127 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.174     High  
cufflinks 16.085     High  
cufflinks 22.557     High  
cufflinks 18.936     High  
cufflinks 38.175     High High
cufflinks 18.828     High  
cufflinks 14.162     High Low
cufflinks 20.924     High  
cufflinks 22.404     High  
cufflinks 37.141     High High
cufflinks 26.841     High  
cufflinks 29.596     High  
cufflinks 26.134     High  
cufflinks 24.949     High  
cufflinks 26.923     High  
cufflinks 21.059     High  
cufflinks 24.083     High  
cufflinks 13.075     High Low
cufflinks 31.754     High High
cufflinks 25.672     High  
cufflinks 13.03     High Low
cufflinks 44.884     High High
cufflinks 19.745     High  
cufflinks 21.608     High  
cufflinks 19.359     High  
cufflinks 27.932     High  
cufflinks 18.129     High  
cufflinks 29.604     High  
cufflinks 32.634     High High
cufflinks 16.54     High  

0 Strain