Gene : Bradi2g25090 B. distachyon v3.1
Defline:  (1 of 2) PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Genomic Order:  3177
Name:  ? Bradi2g25090 Secondary Identifier:  ? PAC:32774510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25090 0.5kb upstream 0.5kb upstream 5932 true Bd2: 22905977-22911908 Brachypodium distachyon
Bradi2g25090 0.5kb upstream 0.5kb upstream 500 false Bd2: 22905977-22906476 Brachypodium distachyon
Bradi2g25090 0.5kb downstream 0.5kb downstream 5932 true Bd2: 22906477-22912408 Brachypodium distachyon
Bradi2g25090 0.5kb downstream 0.5kb downstream 500 false Bd2: 22911909-22912408 Brachypodium distachyon
Bradi2g25090 1.0kb upstream 1.0kb upstream 6432 true Bd2: 22905477-22911908 Brachypodium distachyon
Bradi2g25090 1.0kb upstream 1.0kb upstream 1000 false Bd2: 22905477-22906476 Brachypodium distachyon
Bradi2g25090 1.0kb downstream 1.0kb downstream 6432 true Bd2: 22906477-22912908 Brachypodium distachyon
Bradi2g25090 1.0kb downstream 1.0kb downstream 1000 false Bd2: 22911909-22912908 Brachypodium distachyon
Bradi2g25090 2.0kb upstream 2.0kb upstream 7432 true Bd2: 22904477-22911908 Brachypodium distachyon
Bradi2g25090 2.0kb upstream 2.0kb upstream 2000 false Bd2: 22904477-22906476 Brachypodium distachyon
Bradi2g25090 2.0kb downstream 2.0kb downstream 7432 true Bd2: 22906477-22913908 Brachypodium distachyon
Bradi2g25090 2.0kb downstream 2.0kb downstream 2000 false Bd2: 22911909-22913908 Brachypodium distachyon
Bradi2g25090 5.0kb upstream 5.0kb upstream 10432 true Bd2: 22901477-22911908 Brachypodium distachyon
Bradi2g25090 5.0kb upstream 5.0kb upstream 5000 false Bd2: 22901477-22906476 Brachypodium distachyon
Bradi2g25090 5.0kb downstream 5.0kb downstream 10432 true Bd2: 22906477-22916908 Brachypodium distachyon
Bradi2g25090 5.0kb downstream 5.0kb downstream 5000 false Bd2: 22911909-22916908 Brachypodium distachyon
Bradi2g25090 10.0kb upstream 10.0kb upstream 15432 true Bd2: 22896477-22911908 Brachypodium distachyon
Bradi2g25090 10.0kb upstream 10.0kb upstream 10000 false Bd2: 22896477-22906476 Brachypodium distachyon
Bradi2g25090 10.0kb downstream 10.0kb downstream 15432 true Bd2: 22906477-22921908 Brachypodium distachyon
Bradi2g25090 10.0kb downstream 10.0kb downstream 10000 false Bd2: 22911909-22921908 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577876 5269 Grass View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain