Gene : Bradi2g25500 B. distachyon v3.1
Defline:  (1 of 1) PTHR19321//PTHR19321:SF4 - PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED // 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 Genomic Order:  3235
Name:  ? Bradi2g25500 Secondary Identifier:  ? PAC:32779353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25500 0.5kb upstream 0.5kb upstream 6027 true Bd2: 23556267-23562293 Brachypodium distachyon
Bradi2g25500 0.5kb upstream 0.5kb upstream 500 false Bd2: 23561794-23562293 Brachypodium distachyon
Bradi2g25500 0.5kb downstream 0.5kb downstream 6027 true Bd2: 23555767-23561793 Brachypodium distachyon
Bradi2g25500 0.5kb downstream 0.5kb downstream 500 false Bd2: 23555767-23556266 Brachypodium distachyon
Bradi2g25500 1.0kb upstream 1.0kb upstream 6527 true Bd2: 23556267-23562793 Brachypodium distachyon
Bradi2g25500 1.0kb upstream 1.0kb upstream 1000 false Bd2: 23561794-23562793 Brachypodium distachyon
Bradi2g25500 1.0kb downstream 1.0kb downstream 6527 true Bd2: 23555267-23561793 Brachypodium distachyon
Bradi2g25500 1.0kb downstream 1.0kb downstream 1000 false Bd2: 23555267-23556266 Brachypodium distachyon
Bradi2g25500 2.0kb upstream 2.0kb upstream 7527 true Bd2: 23556267-23563793 Brachypodium distachyon
Bradi2g25500 2.0kb upstream 2.0kb upstream 2000 false Bd2: 23561794-23563793 Brachypodium distachyon
Bradi2g25500 2.0kb downstream 2.0kb downstream 7527 true Bd2: 23554267-23561793 Brachypodium distachyon
Bradi2g25500 2.0kb downstream 2.0kb downstream 2000 false Bd2: 23554267-23556266 Brachypodium distachyon
Bradi2g25500 5.0kb upstream 5.0kb upstream 10527 true Bd2: 23556267-23566793 Brachypodium distachyon
Bradi2g25500 5.0kb upstream 5.0kb upstream 5000 false Bd2: 23561794-23566793 Brachypodium distachyon
Bradi2g25500 5.0kb downstream 5.0kb downstream 10527 true Bd2: 23551267-23561793 Brachypodium distachyon
Bradi2g25500 5.0kb downstream 5.0kb downstream 5000 false Bd2: 23551267-23556266 Brachypodium distachyon
Bradi2g25500 10.0kb upstream 10.0kb upstream 15527 true Bd2: 23556267-23571793 Brachypodium distachyon
Bradi2g25500 10.0kb upstream 10.0kb upstream 10000 false Bd2: 23561794-23571793 Brachypodium distachyon
Bradi2g25500 10.0kb downstream 10.0kb downstream 15527 true Bd2: 23546267-23561793 Brachypodium distachyon
Bradi2g25500 10.0kb downstream 10.0kb downstream 10000 false Bd2: 23546267-23556266 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578549 5269 Grass View MSA
122048395 5273 Angiosperm View MSA
121310952 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.711        
cufflinks 5.996        
cufflinks 6.497        
cufflinks 5.227        
cufflinks 3.032        
cufflinks 5.082        
cufflinks 5.048        
cufflinks 4.239        
cufflinks 4.441        
cufflinks 3.579        
cufflinks 0.245       Low
cufflinks 4.58        
cufflinks 0.308       Low
cufflinks 0.177       Low
cufflinks 1.194        
cufflinks 5.49        
cufflinks 4.744        
cufflinks 8.822       High
cufflinks 3.702        
cufflinks 1.564        
cufflinks 3.617        
cufflinks 5.658        
cufflinks 3.873        
cufflinks 3.855        
cufflinks 5.108        
cufflinks 5.876        
cufflinks 0.207       Low
cufflinks 4.794        
cufflinks 4.977        
cufflinks 6.939        

0 Strain