Gene : Bradi2g25540 B. distachyon v3.1
Genomic Order:  3240 Name:  ? Bradi2g25540
Secondary Identifier:  ? PAC:32773366
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25540 0.5kb upstream 0.5kb upstream 4958 true Bd2: 23595322-23600279 Brachypodium distachyon
Bradi2g25540 0.5kb upstream 0.5kb upstream 500 false Bd2: 23595322-23595821 Brachypodium distachyon
Bradi2g25540 0.5kb downstream 0.5kb downstream 4958 true Bd2: 23595822-23600779 Brachypodium distachyon
Bradi2g25540 0.5kb downstream 0.5kb downstream 500 false Bd2: 23600280-23600779 Brachypodium distachyon
Bradi2g25540 1.0kb upstream 1.0kb upstream 5458 true Bd2: 23594822-23600279 Brachypodium distachyon
Bradi2g25540 1.0kb upstream 1.0kb upstream 1000 false Bd2: 23594822-23595821 Brachypodium distachyon
Bradi2g25540 1.0kb downstream 1.0kb downstream 5458 true Bd2: 23595822-23601279 Brachypodium distachyon
Bradi2g25540 1.0kb downstream 1.0kb downstream 1000 false Bd2: 23600280-23601279 Brachypodium distachyon
Bradi2g25540 2.0kb upstream 2.0kb upstream 6458 true Bd2: 23593822-23600279 Brachypodium distachyon
Bradi2g25540 2.0kb upstream 2.0kb upstream 2000 false Bd2: 23593822-23595821 Brachypodium distachyon
Bradi2g25540 2.0kb downstream 2.0kb downstream 6458 true Bd2: 23595822-23602279 Brachypodium distachyon
Bradi2g25540 2.0kb downstream 2.0kb downstream 2000 false Bd2: 23600280-23602279 Brachypodium distachyon
Bradi2g25540 5.0kb upstream 5.0kb upstream 9458 true Bd2: 23590822-23600279 Brachypodium distachyon
Bradi2g25540 5.0kb upstream 5.0kb upstream 5000 false Bd2: 23590822-23595821 Brachypodium distachyon
Bradi2g25540 5.0kb downstream 5.0kb downstream 9458 true Bd2: 23595822-23605279 Brachypodium distachyon
Bradi2g25540 5.0kb downstream 5.0kb downstream 5000 false Bd2: 23600280-23605279 Brachypodium distachyon
Bradi2g25540 10.0kb upstream 10.0kb upstream 14458 true Bd2: 23585822-23600279 Brachypodium distachyon
Bradi2g25540 10.0kb upstream 10.0kb upstream 10000 false Bd2: 23585822-23595821 Brachypodium distachyon
Bradi2g25540 10.0kb downstream 10.0kb downstream 14458 true Bd2: 23595822-23610279 Brachypodium distachyon
Bradi2g25540 10.0kb downstream 10.0kb downstream 10000 false Bd2: 23600280-23610279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586941 5269 Grass View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.81        
cufflinks 4.285        
cufflinks 4.167        
cufflinks 3.543        
cufflinks 4.346        
cufflinks 3.722        
cufflinks 3.61        
cufflinks 3.802        
cufflinks 3.799        
cufflinks 2.916       Low
cufflinks 2.833       Low
cufflinks 4.772        
cufflinks 3.142        
cufflinks 2.46       Low
cufflinks 4.79        
cufflinks 4.09        
cufflinks 3.09        
cufflinks 5.784       High
cufflinks 4.391        
cufflinks 3.506        
cufflinks 4.602        
cufflinks 4.047        
cufflinks 3.703        
cufflinks 3.527        
cufflinks 3.373        
cufflinks 4.108        
cufflinks 3.969        
cufflinks 3.493        
cufflinks 3.711        
cufflinks 5.57       High

0 Strain