Gene : Bradi2g25610 B. distachyon v3.1
Defline:  (1 of 3) PTHR19847 - WD40 REPEAT PROTEIN Genomic Order:  3250
Name:  ? Bradi2g25610 Secondary Identifier:  ? PAC:32774517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25610 0.5kb upstream 0.5kb upstream 11458 true Bd2: 23709580-23721037 Brachypodium distachyon
Bradi2g25610 0.5kb upstream 0.5kb upstream 500 false Bd2: 23709580-23710079 Brachypodium distachyon
Bradi2g25610 0.5kb downstream 0.5kb downstream 11458 true Bd2: 23710080-23721537 Brachypodium distachyon
Bradi2g25610 0.5kb downstream 0.5kb downstream 500 false Bd2: 23721038-23721537 Brachypodium distachyon
Bradi2g25610 1.0kb upstream 1.0kb upstream 11958 true Bd2: 23709080-23721037 Brachypodium distachyon
Bradi2g25610 1.0kb upstream 1.0kb upstream 1000 false Bd2: 23709080-23710079 Brachypodium distachyon
Bradi2g25610 1.0kb downstream 1.0kb downstream 11958 true Bd2: 23710080-23722037 Brachypodium distachyon
Bradi2g25610 1.0kb downstream 1.0kb downstream 1000 false Bd2: 23721038-23722037 Brachypodium distachyon
Bradi2g25610 2.0kb upstream 2.0kb upstream 12958 true Bd2: 23708080-23721037 Brachypodium distachyon
Bradi2g25610 2.0kb upstream 2.0kb upstream 2000 false Bd2: 23708080-23710079 Brachypodium distachyon
Bradi2g25610 2.0kb downstream 2.0kb downstream 12958 true Bd2: 23710080-23723037 Brachypodium distachyon
Bradi2g25610 2.0kb downstream 2.0kb downstream 2000 false Bd2: 23721038-23723037 Brachypodium distachyon
Bradi2g25610 5.0kb upstream 5.0kb upstream 15958 true Bd2: 23705080-23721037 Brachypodium distachyon
Bradi2g25610 5.0kb upstream 5.0kb upstream 5000 false Bd2: 23705080-23710079 Brachypodium distachyon
Bradi2g25610 5.0kb downstream 5.0kb downstream 15958 true Bd2: 23710080-23726037 Brachypodium distachyon
Bradi2g25610 5.0kb downstream 5.0kb downstream 5000 false Bd2: 23721038-23726037 Brachypodium distachyon
Bradi2g25610 10.0kb upstream 10.0kb upstream 20958 true Bd2: 23700080-23721037 Brachypodium distachyon
Bradi2g25610 10.0kb upstream 10.0kb upstream 10000 false Bd2: 23700080-23710079 Brachypodium distachyon
Bradi2g25610 10.0kb downstream 10.0kb downstream 20958 true Bd2: 23710080-23731037 Brachypodium distachyon
Bradi2g25610 10.0kb downstream 10.0kb downstream 10000 false Bd2: 23721038-23731037 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575017 5269 Grass View MSA
122047753 5273 Angiosperm View MSA
121344393 5274 Embryophyte View MSA
123427446 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.602        
cufflinks 2.852        
cufflinks 2.824        
cufflinks 2.892        
cufflinks 1.725       Low
cufflinks 2.87        
cufflinks 2.714        
cufflinks 3.211        
cufflinks 3.193        
cufflinks 3.891        
cufflinks 6.113       High
cufflinks 3.194        
cufflinks 5.064       High
cufflinks 4.516       High
cufflinks 3.405        
cufflinks 2.742        
cufflinks 2.785        
cufflinks 1.654       Low
cufflinks 3.12        
cufflinks 2.682        
cufflinks 2.984        
cufflinks 4.724       High
cufflinks 3.293        
cufflinks 3.2        
cufflinks 2.949        
cufflinks 3.056        
cufflinks 6.36       High
cufflinks 3.301        
cufflinks 3.739        
cufflinks 2.501        

0 Strain