Gene : Bradi4g32500 B. distachyon v3.1
Defline:  (1 of 1) KOG1865//KOG1871 - Ubiquitin carboxyl-terminal hydrolase // Ubiquitin-specific protease Genomic Order:  4172
Name:  ? Bradi4g32500 Secondary Identifier:  ? PAC:32788339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g32500 0.5kb upstream 0.5kb upstream 12555 true Bd4: 38048966-38061520 Brachypodium distachyon
Bradi4g32500 0.5kb upstream 0.5kb upstream 500 false Bd4: 38061021-38061520 Brachypodium distachyon
Bradi4g32500 0.5kb downstream 0.5kb downstream 12555 true Bd4: 38048466-38061020 Brachypodium distachyon
Bradi4g32500 0.5kb downstream 0.5kb downstream 500 false Bd4: 38048466-38048965 Brachypodium distachyon
Bradi4g32500 1.0kb upstream 1.0kb upstream 13055 true Bd4: 38048966-38062020 Brachypodium distachyon
Bradi4g32500 1.0kb upstream 1.0kb upstream 1000 false Bd4: 38061021-38062020 Brachypodium distachyon
Bradi4g32500 1.0kb downstream 1.0kb downstream 13055 true Bd4: 38047966-38061020 Brachypodium distachyon
Bradi4g32500 1.0kb downstream 1.0kb downstream 1000 false Bd4: 38047966-38048965 Brachypodium distachyon
Bradi4g32500 2.0kb upstream 2.0kb upstream 14055 true Bd4: 38048966-38063020 Brachypodium distachyon
Bradi4g32500 2.0kb upstream 2.0kb upstream 2000 false Bd4: 38061021-38063020 Brachypodium distachyon
Bradi4g32500 2.0kb downstream 2.0kb downstream 14055 true Bd4: 38046966-38061020 Brachypodium distachyon
Bradi4g32500 2.0kb downstream 2.0kb downstream 2000 false Bd4: 38046966-38048965 Brachypodium distachyon
Bradi4g32500 5.0kb upstream 5.0kb upstream 17055 true Bd4: 38048966-38066020 Brachypodium distachyon
Bradi4g32500 5.0kb upstream 5.0kb upstream 5000 false Bd4: 38061021-38066020 Brachypodium distachyon
Bradi4g32500 5.0kb downstream 5.0kb downstream 17055 true Bd4: 38043966-38061020 Brachypodium distachyon
Bradi4g32500 5.0kb downstream 5.0kb downstream 5000 false Bd4: 38043966-38048965 Brachypodium distachyon
Bradi4g32500 10.0kb upstream 10.0kb upstream 22055 true Bd4: 38048966-38071020 Brachypodium distachyon
Bradi4g32500 10.0kb upstream 10.0kb upstream 10000 false Bd4: 38061021-38071020 Brachypodium distachyon
Bradi4g32500 10.0kb downstream 10.0kb downstream 22055 true Bd4: 38038966-38061020 Brachypodium distachyon
Bradi4g32500 10.0kb downstream 10.0kb downstream 10000 false Bd4: 38038966-38048965 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587148 5269 Grass View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.013     Low  
cufflinks 0.007     Low  
cufflinks 0.014     Low  
cufflinks 0.003     Low  
cufflinks 0.008     Low  
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.008     Low  
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.004     Low  
cufflinks 0.013     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.011     Low  
cufflinks 0.013     Low  

0 Strain