Gene : Bradi2g25830 B. distachyon v3.1
Defline:  (1 of 1) PTHR13068:SF24 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Genomic Order:  3280
Name:  ? Bradi2g25830 Secondary Identifier:  ? PAC:32775959
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25830 0.5kb upstream 0.5kb upstream 3186 true Bd2: 24034631-24037816 Brachypodium distachyon
Bradi2g25830 0.5kb upstream 0.5kb upstream 500 false Bd2: 24037317-24037816 Brachypodium distachyon
Bradi2g25830 0.5kb downstream 0.5kb downstream 3186 true Bd2: 24034131-24037316 Brachypodium distachyon
Bradi2g25830 0.5kb downstream 0.5kb downstream 500 false Bd2: 24034131-24034630 Brachypodium distachyon
Bradi2g25830 1.0kb upstream 1.0kb upstream 3686 true Bd2: 24034631-24038316 Brachypodium distachyon
Bradi2g25830 1.0kb upstream 1.0kb upstream 1000 false Bd2: 24037317-24038316 Brachypodium distachyon
Bradi2g25830 1.0kb downstream 1.0kb downstream 3686 true Bd2: 24033631-24037316 Brachypodium distachyon
Bradi2g25830 1.0kb downstream 1.0kb downstream 1000 false Bd2: 24033631-24034630 Brachypodium distachyon
Bradi2g25830 2.0kb upstream 2.0kb upstream 4686 true Bd2: 24034631-24039316 Brachypodium distachyon
Bradi2g25830 2.0kb upstream 2.0kb upstream 2000 false Bd2: 24037317-24039316 Brachypodium distachyon
Bradi2g25830 2.0kb downstream 2.0kb downstream 4686 true Bd2: 24032631-24037316 Brachypodium distachyon
Bradi2g25830 2.0kb downstream 2.0kb downstream 2000 false Bd2: 24032631-24034630 Brachypodium distachyon
Bradi2g25830 5.0kb upstream 5.0kb upstream 7686 true Bd2: 24034631-24042316 Brachypodium distachyon
Bradi2g25830 5.0kb upstream 5.0kb upstream 5000 false Bd2: 24037317-24042316 Brachypodium distachyon
Bradi2g25830 5.0kb downstream 5.0kb downstream 7686 true Bd2: 24029631-24037316 Brachypodium distachyon
Bradi2g25830 5.0kb downstream 5.0kb downstream 5000 false Bd2: 24029631-24034630 Brachypodium distachyon
Bradi2g25830 10.0kb upstream 10.0kb upstream 12686 true Bd2: 24034631-24047316 Brachypodium distachyon
Bradi2g25830 10.0kb upstream 10.0kb upstream 10000 false Bd2: 24037317-24047316 Brachypodium distachyon
Bradi2g25830 10.0kb downstream 10.0kb downstream 12686 true Bd2: 24024631-24037316 Brachypodium distachyon
Bradi2g25830 10.0kb downstream 10.0kb downstream 10000 false Bd2: 24024631-24034630 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
124580695 5269 Grass View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.051        
cufflinks 9.177        
cufflinks 7.367        
cufflinks 8.829        
cufflinks 2.997       Low
cufflinks 7.088        
cufflinks 8.568        
cufflinks 7.239        
cufflinks 6.435        
cufflinks 9.103        
cufflinks 6.448        
cufflinks 7.706        
cufflinks 5.005        
cufflinks 7.516        
cufflinks 4.838        
cufflinks 9.348        
cufflinks 7.235        
cufflinks 2.506       Low
cufflinks 4.829        
cufflinks 2.973       Low
cufflinks 6.55        
cufflinks 6.27        
cufflinks 6.876        
cufflinks 6.951        
cufflinks 7.728        
cufflinks 7.548        
cufflinks 4.734        
cufflinks 6.848        
cufflinks 6.846        
cufflinks 9.777       High

0 Strain