Gene : Bradi2g25857 B. distachyon v3.1
Defline:  (1 of 1) PTHR24093:SF82 - CATION-TRANSPORTING ATPASE 13A1-RELATED Genomic Order:  3285
Name:  ? Bradi2g25857 Secondary Identifier:  ? PAC:32773913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25857 0.5kb upstream 0.5kb upstream 13406 true Bd2: 24054569-24067974 Brachypodium distachyon
Bradi2g25857 0.5kb upstream 0.5kb upstream 500 false Bd2: 24054569-24055068 Brachypodium distachyon
Bradi2g25857 0.5kb downstream 0.5kb downstream 13406 true Bd2: 24055069-24068474 Brachypodium distachyon
Bradi2g25857 0.5kb downstream 0.5kb downstream 500 false Bd2: 24067975-24068474 Brachypodium distachyon
Bradi2g25857 1.0kb upstream 1.0kb upstream 13906 true Bd2: 24054069-24067974 Brachypodium distachyon
Bradi2g25857 1.0kb upstream 1.0kb upstream 1000 false Bd2: 24054069-24055068 Brachypodium distachyon
Bradi2g25857 1.0kb downstream 1.0kb downstream 13906 true Bd2: 24055069-24068974 Brachypodium distachyon
Bradi2g25857 1.0kb downstream 1.0kb downstream 1000 false Bd2: 24067975-24068974 Brachypodium distachyon
Bradi2g25857 2.0kb upstream 2.0kb upstream 14906 true Bd2: 24053069-24067974 Brachypodium distachyon
Bradi2g25857 2.0kb upstream 2.0kb upstream 2000 false Bd2: 24053069-24055068 Brachypodium distachyon
Bradi2g25857 2.0kb downstream 2.0kb downstream 14906 true Bd2: 24055069-24069974 Brachypodium distachyon
Bradi2g25857 2.0kb downstream 2.0kb downstream 2000 false Bd2: 24067975-24069974 Brachypodium distachyon
Bradi2g25857 5.0kb upstream 5.0kb upstream 17906 true Bd2: 24050069-24067974 Brachypodium distachyon
Bradi2g25857 5.0kb upstream 5.0kb upstream 5000 false Bd2: 24050069-24055068 Brachypodium distachyon
Bradi2g25857 5.0kb downstream 5.0kb downstream 17906 true Bd2: 24055069-24072974 Brachypodium distachyon
Bradi2g25857 5.0kb downstream 5.0kb downstream 5000 false Bd2: 24067975-24072974 Brachypodium distachyon
Bradi2g25857 10.0kb upstream 10.0kb upstream 22906 true Bd2: 24045069-24067974 Brachypodium distachyon
Bradi2g25857 10.0kb upstream 10.0kb upstream 10000 false Bd2: 24045069-24055068 Brachypodium distachyon
Bradi2g25857 10.0kb downstream 10.0kb downstream 22906 true Bd2: 24055069-24077974 Brachypodium distachyon
Bradi2g25857 10.0kb downstream 10.0kb downstream 10000 false Bd2: 24067975-24077974 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
124580561 5269 Grass View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.152        
cufflinks 7.771        
cufflinks 7.823        
cufflinks 5.539        
cufflinks 2.374       Low
cufflinks 6.91        
cufflinks 6.429        
cufflinks 5.44        
cufflinks 6.541        
cufflinks 4.178        
cufflinks 5.763        
cufflinks 6.769        
cufflinks 4.404        
cufflinks 4.107        
cufflinks 3.495        
cufflinks 7.411        
cufflinks 3.275        
cufflinks 15.156     High High
cufflinks 6.531        
cufflinks 1.695       Low
cufflinks 5.196        
cufflinks 8.405        
cufflinks 5.436        
cufflinks 5.481        
cufflinks 5.031        
cufflinks 6.599        
cufflinks 6.042        
cufflinks 6.671        
cufflinks 7.008        
cufflinks 7.392        

0 Strain