Gene : Bradi2g25745 B. distachyon v3.1
Defline:  (1 of 1) 2.7.9.1 - Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase Genomic Order:  3269
Name:  ? Bradi2g25745 Secondary Identifier:  ? PAC:32774287
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-241 Brachypodium distachyon pathologic  
Bdistachyon PWY-6549 Brachypodium distachyon pathologic  
Bdistachyon PWY-7115 Brachypodium distachyon pathologic  
Bdistachyon PWY-7117 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25745 0.5kb upstream 0.5kb upstream 16406 true Bd2: 23900305-23916710 Brachypodium distachyon
Bradi2g25745 0.5kb upstream 0.5kb upstream 500 false Bd2: 23900305-23900804 Brachypodium distachyon
Bradi2g25745 0.5kb downstream 0.5kb downstream 16406 true Bd2: 23900805-23917210 Brachypodium distachyon
Bradi2g25745 0.5kb downstream 0.5kb downstream 500 false Bd2: 23916711-23917210 Brachypodium distachyon
Bradi2g25745 1.0kb upstream 1.0kb upstream 16906 true Bd2: 23899805-23916710 Brachypodium distachyon
Bradi2g25745 1.0kb upstream 1.0kb upstream 1000 false Bd2: 23899805-23900804 Brachypodium distachyon
Bradi2g25745 1.0kb downstream 1.0kb downstream 16906 true Bd2: 23900805-23917710 Brachypodium distachyon
Bradi2g25745 1.0kb downstream 1.0kb downstream 1000 false Bd2: 23916711-23917710 Brachypodium distachyon
Bradi2g25745 2.0kb upstream 2.0kb upstream 17906 true Bd2: 23898805-23916710 Brachypodium distachyon
Bradi2g25745 2.0kb upstream 2.0kb upstream 2000 false Bd2: 23898805-23900804 Brachypodium distachyon
Bradi2g25745 2.0kb downstream 2.0kb downstream 17906 true Bd2: 23900805-23918710 Brachypodium distachyon
Bradi2g25745 2.0kb downstream 2.0kb downstream 2000 false Bd2: 23916711-23918710 Brachypodium distachyon
Bradi2g25745 5.0kb upstream 5.0kb upstream 20906 true Bd2: 23895805-23916710 Brachypodium distachyon
Bradi2g25745 5.0kb upstream 5.0kb upstream 5000 false Bd2: 23895805-23900804 Brachypodium distachyon
Bradi2g25745 5.0kb downstream 5.0kb downstream 20906 true Bd2: 23900805-23921710 Brachypodium distachyon
Bradi2g25745 5.0kb downstream 5.0kb downstream 5000 false Bd2: 23916711-23921710 Brachypodium distachyon
Bradi2g25745 10.0kb upstream 10.0kb upstream 25906 true Bd2: 23890805-23916710 Brachypodium distachyon
Bradi2g25745 10.0kb upstream 10.0kb upstream 10000 false Bd2: 23890805-23900804 Brachypodium distachyon
Bradi2g25745 10.0kb downstream 10.0kb downstream 25906 true Bd2: 23900805-23926710 Brachypodium distachyon
Bradi2g25745 10.0kb downstream 10.0kb downstream 10000 false Bd2: 23916711-23926710 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580317 5269 Grass View MSA
122045986 5273 Angiosperm View MSA
121345134 5274 Embryophyte View MSA
123425418 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.924     High  
cufflinks 5.609        
cufflinks 10.026        
cufflinks 8.175        
cufflinks 9.858     High  
cufflinks 9.645     High  
cufflinks 6.059        
cufflinks 13.335     High  
cufflinks 13.272     High  
cufflinks 8.597        
cufflinks 21.081     High High
cufflinks 11.906     High  
cufflinks 17.42     High  
cufflinks 19.572     High High
cufflinks 12.254     High  
cufflinks 9.809     High  
cufflinks 8.166        
cufflinks 0.496       Low
cufflinks 3.326       Low
cufflinks 5.68        
cufflinks 3.583       Low
cufflinks 13.168     High  
cufflinks 15.083     High  
cufflinks 13.993     High  
cufflinks 8.573        
cufflinks 9.409        
cufflinks 25.03     High High
cufflinks 10.671        
cufflinks 11.01     High  
cufflinks 2.523       Low

0 Strain