Gene : Bradi4g33060 B. distachyon v3.1
Defline:  (1 of 1) KOG1951 - GTP-binding protein AARP2 involved in 40S ribosome biogenesis Genomic Order:  4245
Name:  ? Bradi4g33060 Secondary Identifier:  ? PAC:32790910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g33060 0.5kb upstream 0.5kb upstream 8298 true Bd4: 38745518-38753815 Brachypodium distachyon
Bradi4g33060 0.5kb upstream 0.5kb upstream 500 false Bd4: 38745518-38746017 Brachypodium distachyon
Bradi4g33060 0.5kb downstream 0.5kb downstream 8298 true Bd4: 38746018-38754315 Brachypodium distachyon
Bradi4g33060 0.5kb downstream 0.5kb downstream 500 false Bd4: 38753816-38754315 Brachypodium distachyon
Bradi4g33060 1.0kb upstream 1.0kb upstream 8798 true Bd4: 38745018-38753815 Brachypodium distachyon
Bradi4g33060 1.0kb upstream 1.0kb upstream 1000 false Bd4: 38745018-38746017 Brachypodium distachyon
Bradi4g33060 1.0kb downstream 1.0kb downstream 8798 true Bd4: 38746018-38754815 Brachypodium distachyon
Bradi4g33060 1.0kb downstream 1.0kb downstream 1000 false Bd4: 38753816-38754815 Brachypodium distachyon
Bradi4g33060 2.0kb upstream 2.0kb upstream 9798 true Bd4: 38744018-38753815 Brachypodium distachyon
Bradi4g33060 2.0kb upstream 2.0kb upstream 2000 false Bd4: 38744018-38746017 Brachypodium distachyon
Bradi4g33060 2.0kb downstream 2.0kb downstream 9798 true Bd4: 38746018-38755815 Brachypodium distachyon
Bradi4g33060 2.0kb downstream 2.0kb downstream 2000 false Bd4: 38753816-38755815 Brachypodium distachyon
Bradi4g33060 5.0kb upstream 5.0kb upstream 12798 true Bd4: 38741018-38753815 Brachypodium distachyon
Bradi4g33060 5.0kb upstream 5.0kb upstream 5000 false Bd4: 38741018-38746017 Brachypodium distachyon
Bradi4g33060 5.0kb downstream 5.0kb downstream 12798 true Bd4: 38746018-38758815 Brachypodium distachyon
Bradi4g33060 5.0kb downstream 5.0kb downstream 5000 false Bd4: 38753816-38758815 Brachypodium distachyon
Bradi4g33060 10.0kb upstream 10.0kb upstream 17798 true Bd4: 38736018-38753815 Brachypodium distachyon
Bradi4g33060 10.0kb upstream 10.0kb upstream 10000 false Bd4: 38736018-38746017 Brachypodium distachyon
Bradi4g33060 10.0kb downstream 10.0kb downstream 17798 true Bd4: 38746018-38763815 Brachypodium distachyon
Bradi4g33060 10.0kb downstream 10.0kb downstream 10000 false Bd4: 38753816-38763815 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568344 5269 Grass View MSA
122049867 5273 Angiosperm View MSA
121311623 5274 Embryophyte View MSA
123348896 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.872        
cufflinks 2.929        
cufflinks 3.168        
cufflinks 2.178        
cufflinks 0.699        
cufflinks 2.875        
cufflinks 2.334        
cufflinks 1.683        
cufflinks 2.139        
cufflinks 1.102        
cufflinks 0.1       Low
cufflinks 2.458        
cufflinks 0.067       Low
cufflinks 0.061     Low Low
cufflinks 0.398        
cufflinks 2.648        
cufflinks 0.712        
cufflinks 4.087       High
cufflinks 1.111        
cufflinks 0.326        
cufflinks 0.926        
cufflinks 2.955        
cufflinks 1.693        
cufflinks 1.693        
cufflinks 1.963        
cufflinks 2.275        
cufflinks 0.077     Low Low
cufflinks 1.811        
cufflinks 1.71        
cufflinks 3.284        

0 Strain