Gene : Bradi2g25940 B. distachyon v3.1
Defline:  (1 of 1) K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Genomic Order:  3298
Name:  ? Bradi2g25940 Secondary Identifier:  ? PAC:32772790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25940 0.5kb upstream 0.5kb upstream 3121 true Bd2: 24202888-24206008 Brachypodium distachyon
Bradi2g25940 0.5kb upstream 0.5kb upstream 500 false Bd2: 24202888-24203387 Brachypodium distachyon
Bradi2g25940 0.5kb downstream 0.5kb downstream 3121 true Bd2: 24203388-24206508 Brachypodium distachyon
Bradi2g25940 0.5kb downstream 0.5kb downstream 500 false Bd2: 24206009-24206508 Brachypodium distachyon
Bradi2g25940 1.0kb upstream 1.0kb upstream 3621 true Bd2: 24202388-24206008 Brachypodium distachyon
Bradi2g25940 1.0kb upstream 1.0kb upstream 1000 false Bd2: 24202388-24203387 Brachypodium distachyon
Bradi2g25940 1.0kb downstream 1.0kb downstream 3621 true Bd2: 24203388-24207008 Brachypodium distachyon
Bradi2g25940 1.0kb downstream 1.0kb downstream 1000 false Bd2: 24206009-24207008 Brachypodium distachyon
Bradi2g25940 2.0kb upstream 2.0kb upstream 4621 true Bd2: 24201388-24206008 Brachypodium distachyon
Bradi2g25940 2.0kb upstream 2.0kb upstream 2000 false Bd2: 24201388-24203387 Brachypodium distachyon
Bradi2g25940 2.0kb downstream 2.0kb downstream 4621 true Bd2: 24203388-24208008 Brachypodium distachyon
Bradi2g25940 2.0kb downstream 2.0kb downstream 2000 false Bd2: 24206009-24208008 Brachypodium distachyon
Bradi2g25940 5.0kb upstream 5.0kb upstream 7621 true Bd2: 24198388-24206008 Brachypodium distachyon
Bradi2g25940 5.0kb upstream 5.0kb upstream 5000 false Bd2: 24198388-24203387 Brachypodium distachyon
Bradi2g25940 5.0kb downstream 5.0kb downstream 7621 true Bd2: 24203388-24211008 Brachypodium distachyon
Bradi2g25940 5.0kb downstream 5.0kb downstream 5000 false Bd2: 24206009-24211008 Brachypodium distachyon
Bradi2g25940 10.0kb upstream 10.0kb upstream 12621 true Bd2: 24193388-24206008 Brachypodium distachyon
Bradi2g25940 10.0kb upstream 10.0kb upstream 10000 false Bd2: 24193388-24203387 Brachypodium distachyon
Bradi2g25940 10.0kb downstream 10.0kb downstream 12621 true Bd2: 24203388-24216008 Brachypodium distachyon
Bradi2g25940 10.0kb downstream 10.0kb downstream 10000 false Bd2: 24206009-24216008 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570510 5269 Grass View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.971     High  
cufflinks 13.918     High  
cufflinks 16.494     High  
cufflinks 20.244     High  
cufflinks 15.022     High  
cufflinks 12.54     High Low
cufflinks 13.913     High  
cufflinks 12.21     High Low
cufflinks 13.057     High Low
cufflinks 22.24     High  
cufflinks 16.872     High  
cufflinks 12.333     High Low
cufflinks 13.414     High  
cufflinks 14.205     High  
cufflinks 15.233     High  
cufflinks 11.875     High Low
cufflinks 19.396     High  
cufflinks 22.954     High  
cufflinks 23.182     High  
cufflinks 45.015     High High
cufflinks 27.15     High High
cufflinks 16.084     High  
cufflinks 12.516     High Low
cufflinks 13.05     High Low
cufflinks 16.196     High  
cufflinks 23.812     High  
cufflinks 18.592     High  
cufflinks 24.772     High High
cufflinks 19.563     High  
cufflinks 19.256     High  

0 Strain