Gene : Bradi2g34080 B. distachyon v3.1
Defline:  (1 of 2) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) Genomic Order:  4008
Name:  ? Bradi2g34080 Secondary Identifier:  ? PAC:32774171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34080 0.5kb upstream 0.5kb upstream 2444 true Bd2: 33907603-33910046 Brachypodium distachyon
Bradi2g34080 0.5kb upstream 0.5kb upstream 500 false Bd2: 33907603-33908102 Brachypodium distachyon
Bradi2g34080 0.5kb downstream 0.5kb downstream 2444 true Bd2: 33908103-33910546 Brachypodium distachyon
Bradi2g34080 0.5kb downstream 0.5kb downstream 500 false Bd2: 33910047-33910546 Brachypodium distachyon
Bradi2g34080 1.0kb upstream 1.0kb upstream 2944 true Bd2: 33907103-33910046 Brachypodium distachyon
Bradi2g34080 1.0kb upstream 1.0kb upstream 1000 false Bd2: 33907103-33908102 Brachypodium distachyon
Bradi2g34080 1.0kb downstream 1.0kb downstream 2944 true Bd2: 33908103-33911046 Brachypodium distachyon
Bradi2g34080 1.0kb downstream 1.0kb downstream 1000 false Bd2: 33910047-33911046 Brachypodium distachyon
Bradi2g34080 2.0kb upstream 2.0kb upstream 3944 true Bd2: 33906103-33910046 Brachypodium distachyon
Bradi2g34080 2.0kb upstream 2.0kb upstream 2000 false Bd2: 33906103-33908102 Brachypodium distachyon
Bradi2g34080 2.0kb downstream 2.0kb downstream 3944 true Bd2: 33908103-33912046 Brachypodium distachyon
Bradi2g34080 2.0kb downstream 2.0kb downstream 2000 false Bd2: 33910047-33912046 Brachypodium distachyon
Bradi2g34080 5.0kb upstream 5.0kb upstream 6944 true Bd2: 33903103-33910046 Brachypodium distachyon
Bradi2g34080 5.0kb upstream 5.0kb upstream 5000 false Bd2: 33903103-33908102 Brachypodium distachyon
Bradi2g34080 5.0kb downstream 5.0kb downstream 6944 true Bd2: 33908103-33915046 Brachypodium distachyon
Bradi2g34080 5.0kb downstream 5.0kb downstream 5000 false Bd2: 33910047-33915046 Brachypodium distachyon
Bradi2g34080 10.0kb upstream 10.0kb upstream 11944 true Bd2: 33898103-33910046 Brachypodium distachyon
Bradi2g34080 10.0kb upstream 10.0kb upstream 10000 false Bd2: 33898103-33908102 Brachypodium distachyon
Bradi2g34080 10.0kb downstream 10.0kb downstream 11944 true Bd2: 33908103-33920046 Brachypodium distachyon
Bradi2g34080 10.0kb downstream 10.0kb downstream 10000 false Bd2: 33910047-33920046 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583871 5269 Grass View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.032       Low
cufflinks 6.822        
cufflinks 7.541        
cufflinks 8.095        
cufflinks 5.948        
cufflinks 5.419        
cufflinks 6.302        
cufflinks 4.508        
cufflinks 5.189        
cufflinks 8.719        
cufflinks 5.511        
cufflinks 4.947        
cufflinks 3.558       Low
cufflinks 5.625        
cufflinks 3.771       Low
cufflinks 4.324        
cufflinks 5.083        
cufflinks 8.106        
cufflinks 5.375        
cufflinks 4.333        
cufflinks 9.605       High
cufflinks 7.21        
cufflinks 4.527        
cufflinks 4.348        
cufflinks 6.05        
cufflinks 12.715     High High
cufflinks 6.657        
cufflinks 10.753       High
cufflinks 8.253        
cufflinks 7.432        

0 Strain