Gene : Bradi2g34490 B. distachyon v3.1
Defline:  (1 of 1) PTHR18901:SF29 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  4060
Name:  ? Bradi2g34490 Secondary Identifier:  ? PAC:32773183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34490 0.5kb upstream 0.5kb upstream 3935 true Bd2: 34315812-34319746 Brachypodium distachyon
Bradi2g34490 0.5kb upstream 0.5kb upstream 500 false Bd2: 34315812-34316311 Brachypodium distachyon
Bradi2g34490 0.5kb downstream 0.5kb downstream 3935 true Bd2: 34316312-34320246 Brachypodium distachyon
Bradi2g34490 0.5kb downstream 0.5kb downstream 500 false Bd2: 34319747-34320246 Brachypodium distachyon
Bradi2g34490 1.0kb upstream 1.0kb upstream 4435 true Bd2: 34315312-34319746 Brachypodium distachyon
Bradi2g34490 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34315312-34316311 Brachypodium distachyon
Bradi2g34490 1.0kb downstream 1.0kb downstream 4435 true Bd2: 34316312-34320746 Brachypodium distachyon
Bradi2g34490 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34319747-34320746 Brachypodium distachyon
Bradi2g34490 2.0kb upstream 2.0kb upstream 5435 true Bd2: 34314312-34319746 Brachypodium distachyon
Bradi2g34490 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34314312-34316311 Brachypodium distachyon
Bradi2g34490 2.0kb downstream 2.0kb downstream 5435 true Bd2: 34316312-34321746 Brachypodium distachyon
Bradi2g34490 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34319747-34321746 Brachypodium distachyon
Bradi2g34490 5.0kb upstream 5.0kb upstream 8435 true Bd2: 34311312-34319746 Brachypodium distachyon
Bradi2g34490 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34311312-34316311 Brachypodium distachyon
Bradi2g34490 5.0kb downstream 5.0kb downstream 8435 true Bd2: 34316312-34324746 Brachypodium distachyon
Bradi2g34490 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34319747-34324746 Brachypodium distachyon
Bradi2g34490 10.0kb upstream 10.0kb upstream 13435 true Bd2: 34306312-34319746 Brachypodium distachyon
Bradi2g34490 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34306312-34316311 Brachypodium distachyon
Bradi2g34490 10.0kb downstream 10.0kb downstream 13435 true Bd2: 34316312-34329746 Brachypodium distachyon
Bradi2g34490 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34319747-34329746 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576865 5269 Grass View MSA
122044656 5273 Angiosperm View MSA
121344215 5274 Embryophyte View MSA
123426092 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.618     High  
cufflinks 43.924     High  
cufflinks 35.181     High  
cufflinks 41.131     High  
cufflinks 49.217     High  
cufflinks 50.352     High  
cufflinks 44.584     High  
cufflinks 44.317     High  
cufflinks 55.769     High  
cufflinks 41.011     High  
cufflinks 115.563     High High
cufflinks 57.162     High  
cufflinks 82.451     High  
cufflinks 113.075     High High
cufflinks 45.417     High  
cufflinks 51.5     High  
cufflinks 48.713     High  
cufflinks 4.9       Low
cufflinks 58.418     High  
cufflinks 111.403     High High
cufflinks 22.768     High Low
cufflinks 41.91     High  
cufflinks 41.662     High  
cufflinks 51.356     High  
cufflinks 46.742     High  
cufflinks 39.469     High  
cufflinks 111.16     High High
cufflinks 37.675     High  
cufflinks 39.925     High  
cufflinks 16.564     High Low

0 Strain