Gene : Bradi2g34740 B. distachyon v3.1
Defline:  (1 of 1) PTHR21262//PTHR21262:SF12 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  4090
Name:  ? Bradi2g34740 Secondary Identifier:  ? PAC:32782251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34740 0.5kb upstream 0.5kb upstream 3575 true Bd2: 34575573-34579147 Brachypodium distachyon
Bradi2g34740 0.5kb upstream 0.5kb upstream 500 false Bd2: 34578648-34579147 Brachypodium distachyon
Bradi2g34740 0.5kb downstream 0.5kb downstream 3575 true Bd2: 34575073-34578647 Brachypodium distachyon
Bradi2g34740 0.5kb downstream 0.5kb downstream 500 false Bd2: 34575073-34575572 Brachypodium distachyon
Bradi2g34740 1.0kb upstream 1.0kb upstream 4075 true Bd2: 34575573-34579647 Brachypodium distachyon
Bradi2g34740 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34578648-34579647 Brachypodium distachyon
Bradi2g34740 1.0kb downstream 1.0kb downstream 4075 true Bd2: 34574573-34578647 Brachypodium distachyon
Bradi2g34740 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34574573-34575572 Brachypodium distachyon
Bradi2g34740 2.0kb upstream 2.0kb upstream 5075 true Bd2: 34575573-34580647 Brachypodium distachyon
Bradi2g34740 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34578648-34580647 Brachypodium distachyon
Bradi2g34740 2.0kb downstream 2.0kb downstream 5075 true Bd2: 34573573-34578647 Brachypodium distachyon
Bradi2g34740 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34573573-34575572 Brachypodium distachyon
Bradi2g34740 5.0kb upstream 5.0kb upstream 8075 true Bd2: 34575573-34583647 Brachypodium distachyon
Bradi2g34740 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34578648-34583647 Brachypodium distachyon
Bradi2g34740 5.0kb downstream 5.0kb downstream 8075 true Bd2: 34570573-34578647 Brachypodium distachyon
Bradi2g34740 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34570573-34575572 Brachypodium distachyon
Bradi2g34740 10.0kb upstream 10.0kb upstream 13075 true Bd2: 34575573-34588647 Brachypodium distachyon
Bradi2g34740 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34578648-34588647 Brachypodium distachyon
Bradi2g34740 10.0kb downstream 10.0kb downstream 13075 true Bd2: 34565573-34578647 Brachypodium distachyon
Bradi2g34740 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34565573-34575572 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571967 5269 Grass View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.79        
cufflinks 13.227     High  
cufflinks 15.811     High  
cufflinks 13.772     High  
cufflinks 6.16        
cufflinks 11.303     High  
cufflinks 11.107     High  
cufflinks 12.018     High  
cufflinks 10.985     High  
cufflinks 16.817     High  
cufflinks 14.536     High  
cufflinks 13.03     High  
cufflinks 15.127     High  
cufflinks 15.461     High  
cufflinks 13.082     High  
cufflinks 12.222     High  
cufflinks 10.356        
cufflinks 0.53       Low
cufflinks 7.219        
cufflinks 4.001       Low
cufflinks 7.418        
cufflinks 18.323     High  
cufflinks 12.624     High  
cufflinks 12.093     High  
cufflinks 10.804     High  
cufflinks 16.859     High  
cufflinks 15.342     High  
cufflinks 16.859     High  
cufflinks 17.372     High  
cufflinks 7.585        

0 Strain