Gene : Bradi4g41270 B. distachyon v3.1
Defline:  (1 of 3) PTHR10766//PTHR10766:SF48 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  5313
Name:  ? Bradi4g41270 Secondary Identifier:  ? PAC:32785260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41270 0.5kb upstream 0.5kb upstream 6355 true Bd4: 45345657-45352011 Brachypodium distachyon
Bradi4g41270 0.5kb upstream 0.5kb upstream 500 false Bd4: 45351512-45352011 Brachypodium distachyon
Bradi4g41270 0.5kb downstream 0.5kb downstream 6355 true Bd4: 45345157-45351511 Brachypodium distachyon
Bradi4g41270 0.5kb downstream 0.5kb downstream 500 false Bd4: 45345157-45345656 Brachypodium distachyon
Bradi4g41270 1.0kb upstream 1.0kb upstream 6855 true Bd4: 45345657-45352511 Brachypodium distachyon
Bradi4g41270 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45351512-45352511 Brachypodium distachyon
Bradi4g41270 1.0kb downstream 1.0kb downstream 6855 true Bd4: 45344657-45351511 Brachypodium distachyon
Bradi4g41270 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45344657-45345656 Brachypodium distachyon
Bradi4g41270 2.0kb upstream 2.0kb upstream 7855 true Bd4: 45345657-45353511 Brachypodium distachyon
Bradi4g41270 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45351512-45353511 Brachypodium distachyon
Bradi4g41270 2.0kb downstream 2.0kb downstream 7855 true Bd4: 45343657-45351511 Brachypodium distachyon
Bradi4g41270 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45343657-45345656 Brachypodium distachyon
Bradi4g41270 5.0kb upstream 5.0kb upstream 10855 true Bd4: 45345657-45356511 Brachypodium distachyon
Bradi4g41270 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45351512-45356511 Brachypodium distachyon
Bradi4g41270 5.0kb downstream 5.0kb downstream 10855 true Bd4: 45340657-45351511 Brachypodium distachyon
Bradi4g41270 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45340657-45345656 Brachypodium distachyon
Bradi4g41270 10.0kb upstream 10.0kb upstream 15855 true Bd4: 45345657-45361511 Brachypodium distachyon
Bradi4g41270 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45351512-45361511 Brachypodium distachyon
Bradi4g41270 10.0kb downstream 10.0kb downstream 15855 true Bd4: 45335657-45351511 Brachypodium distachyon
Bradi4g41270 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45335657-45345656 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571477 5269 Grass View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.616        
cufflinks 11.66     High  
cufflinks 11.499     High  
cufflinks 10.139        
cufflinks 8.217        
cufflinks 10.328     High  
cufflinks 10.372     High  
cufflinks 9.768     High  
cufflinks 10.207     High  
cufflinks 5.063        
cufflinks 3.28       Low
cufflinks 10.838     High  
cufflinks 3.118       Low
cufflinks 2.531       Low
cufflinks 6.657        
cufflinks 11.471     High  
cufflinks 7.248        
cufflinks 26.494     High High
cufflinks 11.717        
cufflinks 1.405       Low
cufflinks 13.665     High  
cufflinks 10.87     High  
cufflinks 9.845     High  
cufflinks 10.106     High  
cufflinks 9.214        
cufflinks 10.196        
cufflinks 3.387       Low
cufflinks 8.082        
cufflinks 8.338        
cufflinks 18.991     High High

0 Strain