Gene : Bradi4g41390 B. distachyon v3.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF14 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  5327
Name:  ? Bradi4g41390 Secondary Identifier:  ? PAC:32785978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41390 0.5kb upstream 0.5kb upstream 6264 true Bd4: 45428995-45435258 Brachypodium distachyon
Bradi4g41390 0.5kb upstream 0.5kb upstream 500 false Bd4: 45434759-45435258 Brachypodium distachyon
Bradi4g41390 0.5kb downstream 0.5kb downstream 6264 true Bd4: 45428495-45434758 Brachypodium distachyon
Bradi4g41390 0.5kb downstream 0.5kb downstream 500 false Bd4: 45428495-45428994 Brachypodium distachyon
Bradi4g41390 1.0kb upstream 1.0kb upstream 6764 true Bd4: 45428995-45435758 Brachypodium distachyon
Bradi4g41390 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45434759-45435758 Brachypodium distachyon
Bradi4g41390 1.0kb downstream 1.0kb downstream 6764 true Bd4: 45427995-45434758 Brachypodium distachyon
Bradi4g41390 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45427995-45428994 Brachypodium distachyon
Bradi4g41390 2.0kb upstream 2.0kb upstream 7764 true Bd4: 45428995-45436758 Brachypodium distachyon
Bradi4g41390 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45434759-45436758 Brachypodium distachyon
Bradi4g41390 2.0kb downstream 2.0kb downstream 7764 true Bd4: 45426995-45434758 Brachypodium distachyon
Bradi4g41390 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45426995-45428994 Brachypodium distachyon
Bradi4g41390 5.0kb upstream 5.0kb upstream 10764 true Bd4: 45428995-45439758 Brachypodium distachyon
Bradi4g41390 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45434759-45439758 Brachypodium distachyon
Bradi4g41390 5.0kb downstream 5.0kb downstream 10764 true Bd4: 45423995-45434758 Brachypodium distachyon
Bradi4g41390 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45423995-45428994 Brachypodium distachyon
Bradi4g41390 10.0kb upstream 10.0kb upstream 15764 true Bd4: 45428995-45444758 Brachypodium distachyon
Bradi4g41390 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45434759-45444758 Brachypodium distachyon
Bradi4g41390 10.0kb downstream 10.0kb downstream 15764 true Bd4: 45418995-45434758 Brachypodium distachyon
Bradi4g41390 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45418995-45428994 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571634 5269 Grass View MSA
122048757 5273 Angiosperm View MSA
121350622 5274 Embryophyte View MSA
123381820 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.446       Low
cufflinks 2.756        
cufflinks 3.557       High
cufflinks 2.221        
cufflinks 1.509       Low
cufflinks 2.612        
cufflinks 2.486        
cufflinks 2.437        
cufflinks 2.745        
cufflinks 2.679        
cufflinks 3.867       High
cufflinks 3.087        
cufflinks 2.578        
cufflinks 2.525        
cufflinks 1.748        
cufflinks 2.864        
cufflinks 1.81        
cufflinks 3.469        
cufflinks 1.684        
cufflinks 0.874       Low
cufflinks 2.434        
cufflinks 4.052       High
cufflinks 2.54        
cufflinks 2.343        
cufflinks 2.016        
cufflinks 3.12        
cufflinks 3.711       High
cufflinks 3.434        
cufflinks 3.574       High
cufflinks 2.911        

0 Strain