Gene : Bradi4g41440 B. distachyon v3.1
Defline:  (1 of 47) PF14416 - PMR5 N terminal Domain (PMR5N) Genomic Order:  5332
Name:  ? Bradi4g41440 Secondary Identifier:  ? PAC:32786060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41440 0.5kb upstream 0.5kb upstream 4564 true Bd4: 45469360-45473923 Brachypodium distachyon
Bradi4g41440 0.5kb upstream 0.5kb upstream 500 false Bd4: 45473424-45473923 Brachypodium distachyon
Bradi4g41440 0.5kb downstream 0.5kb downstream 4564 true Bd4: 45468860-45473423 Brachypodium distachyon
Bradi4g41440 0.5kb downstream 0.5kb downstream 500 false Bd4: 45468860-45469359 Brachypodium distachyon
Bradi4g41440 1.0kb upstream 1.0kb upstream 5064 true Bd4: 45469360-45474423 Brachypodium distachyon
Bradi4g41440 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45473424-45474423 Brachypodium distachyon
Bradi4g41440 1.0kb downstream 1.0kb downstream 5064 true Bd4: 45468360-45473423 Brachypodium distachyon
Bradi4g41440 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45468360-45469359 Brachypodium distachyon
Bradi4g41440 2.0kb upstream 2.0kb upstream 6064 true Bd4: 45469360-45475423 Brachypodium distachyon
Bradi4g41440 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45473424-45475423 Brachypodium distachyon
Bradi4g41440 2.0kb downstream 2.0kb downstream 6064 true Bd4: 45467360-45473423 Brachypodium distachyon
Bradi4g41440 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45467360-45469359 Brachypodium distachyon
Bradi4g41440 5.0kb upstream 5.0kb upstream 9064 true Bd4: 45469360-45478423 Brachypodium distachyon
Bradi4g41440 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45473424-45478423 Brachypodium distachyon
Bradi4g41440 5.0kb downstream 5.0kb downstream 9064 true Bd4: 45464360-45473423 Brachypodium distachyon
Bradi4g41440 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45464360-45469359 Brachypodium distachyon
Bradi4g41440 10.0kb upstream 10.0kb upstream 14064 true Bd4: 45469360-45483423 Brachypodium distachyon
Bradi4g41440 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45473424-45483423 Brachypodium distachyon
Bradi4g41440 10.0kb downstream 10.0kb downstream 14064 true Bd4: 45459360-45473423 Brachypodium distachyon
Bradi4g41440 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45459360-45469359 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575464 5269 Grass View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.228        
cufflinks 3.412        
cufflinks 3.075        
cufflinks 3.127        
cufflinks 1.124       Low
cufflinks 3.22        
cufflinks 3.07        
cufflinks 2.455        
cufflinks 2.899        
cufflinks 2.01        
cufflinks 0.994       Low
cufflinks 2.949        
cufflinks 1.828        
cufflinks 1.29       Low
cufflinks 2.618        
cufflinks 2.792        
cufflinks 2.049        
cufflinks 3.624        
cufflinks 1.598        
cufflinks 0.656       Low
cufflinks 4.14       High
cufflinks 2.414        
cufflinks 2.221        
cufflinks 3.196        
cufflinks 3.293        
cufflinks 2.949        
cufflinks 2.371        
cufflinks 2.691        
cufflinks 2.734        
cufflinks 4.873       High

0 Strain