Gene : Bradi4g41540 B. distachyon v3.1
Defline:  (1 of 7) PF05911 - Filament-like plant protein, long coiled-coil (FPP) Genomic Order:  5345
Name:  ? Bradi4g41540 Secondary Identifier:  ? PAC:32789591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41540 0.5kb upstream 0.5kb upstream 8644 true Bd4: 45545735-45554378 Brachypodium distachyon
Bradi4g41540 0.5kb upstream 0.5kb upstream 500 false Bd4: 45545735-45546234 Brachypodium distachyon
Bradi4g41540 0.5kb downstream 0.5kb downstream 8644 true Bd4: 45546235-45554878 Brachypodium distachyon
Bradi4g41540 0.5kb downstream 0.5kb downstream 500 false Bd4: 45554379-45554878 Brachypodium distachyon
Bradi4g41540 1.0kb upstream 1.0kb upstream 9144 true Bd4: 45545235-45554378 Brachypodium distachyon
Bradi4g41540 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45545235-45546234 Brachypodium distachyon
Bradi4g41540 1.0kb downstream 1.0kb downstream 9144 true Bd4: 45546235-45555378 Brachypodium distachyon
Bradi4g41540 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45554379-45555378 Brachypodium distachyon
Bradi4g41540 2.0kb upstream 2.0kb upstream 10144 true Bd4: 45544235-45554378 Brachypodium distachyon
Bradi4g41540 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45544235-45546234 Brachypodium distachyon
Bradi4g41540 2.0kb downstream 2.0kb downstream 10144 true Bd4: 45546235-45556378 Brachypodium distachyon
Bradi4g41540 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45554379-45556378 Brachypodium distachyon
Bradi4g41540 5.0kb upstream 5.0kb upstream 13144 true Bd4: 45541235-45554378 Brachypodium distachyon
Bradi4g41540 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45541235-45546234 Brachypodium distachyon
Bradi4g41540 5.0kb downstream 5.0kb downstream 13144 true Bd4: 45546235-45559378 Brachypodium distachyon
Bradi4g41540 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45554379-45559378 Brachypodium distachyon
Bradi4g41540 10.0kb upstream 10.0kb upstream 18144 true Bd4: 45536235-45554378 Brachypodium distachyon
Bradi4g41540 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45536235-45546234 Brachypodium distachyon
Bradi4g41540 10.0kb downstream 10.0kb downstream 18144 true Bd4: 45546235-45564378 Brachypodium distachyon
Bradi4g41540 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45554379-45564378 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568295 5269 Grass View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.486        
cufflinks 0.712        
cufflinks 0.7        
cufflinks 0.619        
cufflinks 0.392        
cufflinks 0.638        
cufflinks 0.543        
cufflinks 0.586        
cufflinks 0.704        
cufflinks 0.409        
cufflinks 0.342        
cufflinks 0.824       High
cufflinks 0.234       Low
cufflinks 0.187       Low
cufflinks 0.329        
cufflinks 0.659        
cufflinks 0.405        
cufflinks 1.033       High
cufflinks 0.282        
cufflinks 0.124     Low Low
cufflinks 0.749        
cufflinks 0.757        
cufflinks 0.553        
cufflinks 0.591        
cufflinks 0.571        
cufflinks 0.599        
cufflinks 0.101       Low
cufflinks 0.492        
cufflinks 0.538        
cufflinks 1.29       High

0 Strain