Gene : Bradi2g36187 B. distachyon v3.1
Defline:  (1 of 1) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  4278
Name:  ? Bradi2g36187 Secondary Identifier:  ? PAC:32782379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36187 0.5kb upstream 0.5kb upstream 2025 true Bd2: 36387830-36389854 Brachypodium distachyon
Bradi2g36187 0.5kb upstream 0.5kb upstream 500 false Bd2: 36387830-36388329 Brachypodium distachyon
Bradi2g36187 0.5kb downstream 0.5kb downstream 2025 true Bd2: 36388330-36390354 Brachypodium distachyon
Bradi2g36187 0.5kb downstream 0.5kb downstream 500 false Bd2: 36389855-36390354 Brachypodium distachyon
Bradi2g36187 1.0kb upstream 1.0kb upstream 2525 true Bd2: 36387330-36389854 Brachypodium distachyon
Bradi2g36187 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36387330-36388329 Brachypodium distachyon
Bradi2g36187 1.0kb downstream 1.0kb downstream 2525 true Bd2: 36388330-36390854 Brachypodium distachyon
Bradi2g36187 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36389855-36390854 Brachypodium distachyon
Bradi2g36187 2.0kb upstream 2.0kb upstream 3525 true Bd2: 36386330-36389854 Brachypodium distachyon
Bradi2g36187 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36386330-36388329 Brachypodium distachyon
Bradi2g36187 2.0kb downstream 2.0kb downstream 3525 true Bd2: 36388330-36391854 Brachypodium distachyon
Bradi2g36187 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36389855-36391854 Brachypodium distachyon
Bradi2g36187 5.0kb upstream 5.0kb upstream 6525 true Bd2: 36383330-36389854 Brachypodium distachyon
Bradi2g36187 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36383330-36388329 Brachypodium distachyon
Bradi2g36187 5.0kb downstream 5.0kb downstream 6525 true Bd2: 36388330-36394854 Brachypodium distachyon
Bradi2g36187 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36389855-36394854 Brachypodium distachyon
Bradi2g36187 10.0kb upstream 10.0kb upstream 11525 true Bd2: 36378330-36389854 Brachypodium distachyon
Bradi2g36187 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36378330-36388329 Brachypodium distachyon
Bradi2g36187 10.0kb downstream 10.0kb downstream 11525 true Bd2: 36388330-36399854 Brachypodium distachyon
Bradi2g36187 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36389855-36399854 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026671 5273 Angiosperm View MSA
124576275 5269 Grass View MSA
121296467 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.509       Low
cufflinks 1.09        
cufflinks 1.809        
cufflinks 0.99        
cufflinks 0.752        
cufflinks 0.85        
cufflinks 1.219        
cufflinks 0.871        
cufflinks 0.872        
cufflinks 3.197       High
cufflinks 1.712        
cufflinks 1.275        
cufflinks 1.818        
cufflinks 1.571        
cufflinks 0.861        
cufflinks 1.221        
cufflinks 1.03        
cufflinks 1.303        
cufflinks 0.862        
cufflinks 0.167       Low
cufflinks 1.979        
cufflinks 1.931        
cufflinks 0.949        
cufflinks 0.92        
cufflinks 1.041        
cufflinks 2.812       High
cufflinks 3.192       High
cufflinks 2.333       High
cufflinks 1.733        
cufflinks 1.38        

0 Strain