Gene : Bradi2g36460 B. distachyon v3.1
Defline:  (1 of 1) PTHR14211 - GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 Genomic Order:  4307
Name:  ? Bradi2g36460 Secondary Identifier:  ? PAC:32775903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36460 0.5kb upstream 0.5kb upstream 6209 true Bd2: 36539047-36545255 Brachypodium distachyon
Bradi2g36460 0.5kb upstream 0.5kb upstream 500 false Bd2: 36544756-36545255 Brachypodium distachyon
Bradi2g36460 0.5kb downstream 0.5kb downstream 6209 true Bd2: 36538547-36544755 Brachypodium distachyon
Bradi2g36460 0.5kb downstream 0.5kb downstream 500 false Bd2: 36538547-36539046 Brachypodium distachyon
Bradi2g36460 1.0kb upstream 1.0kb upstream 6709 true Bd2: 36539047-36545755 Brachypodium distachyon
Bradi2g36460 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36544756-36545755 Brachypodium distachyon
Bradi2g36460 1.0kb downstream 1.0kb downstream 6709 true Bd2: 36538047-36544755 Brachypodium distachyon
Bradi2g36460 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36538047-36539046 Brachypodium distachyon
Bradi2g36460 2.0kb upstream 2.0kb upstream 7709 true Bd2: 36539047-36546755 Brachypodium distachyon
Bradi2g36460 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36544756-36546755 Brachypodium distachyon
Bradi2g36460 2.0kb downstream 2.0kb downstream 7709 true Bd2: 36537047-36544755 Brachypodium distachyon
Bradi2g36460 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36537047-36539046 Brachypodium distachyon
Bradi2g36460 5.0kb upstream 5.0kb upstream 10709 true Bd2: 36539047-36549755 Brachypodium distachyon
Bradi2g36460 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36544756-36549755 Brachypodium distachyon
Bradi2g36460 5.0kb downstream 5.0kb downstream 10709 true Bd2: 36534047-36544755 Brachypodium distachyon
Bradi2g36460 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36534047-36539046 Brachypodium distachyon
Bradi2g36460 10.0kb upstream 10.0kb upstream 15709 true Bd2: 36539047-36554755 Brachypodium distachyon
Bradi2g36460 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36544756-36554755 Brachypodium distachyon
Bradi2g36460 10.0kb downstream 10.0kb downstream 15709 true Bd2: 36529047-36544755 Brachypodium distachyon
Bradi2g36460 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36529047-36539046 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589591 5269 Grass View MSA
122046811 5273 Angiosperm View MSA
121347392 5274 Embryophyte View MSA
123425995 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.285        
cufflinks 7.237        
cufflinks 7.275        
cufflinks 6.105        
cufflinks 5.89        
cufflinks 6.246        
cufflinks 6.496        
cufflinks 5.671        
cufflinks 5.651        
cufflinks 5.44        
cufflinks 2.778       Low
cufflinks 4.601        
cufflinks 1.685       Low
cufflinks 2.182       Low
cufflinks 3.94        
cufflinks 6.243        
cufflinks 6.245        
cufflinks 12.577     High High
cufflinks 10.665       High
cufflinks 5.701        
cufflinks 6.984        
cufflinks 6.974        
cufflinks 5.638        
cufflinks 5.348        
cufflinks 6.843        
cufflinks 7.532        
cufflinks 3.018       Low
cufflinks 7.218        
cufflinks 6.082        
cufflinks 7.338        

0 Strain