Gene : Bradi4g38660 B. distachyon v3.1
Defline:  (1 of 2) K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) Genomic Order:  4985
Name:  ? Bradi4g38660 Secondary Identifier:  ? PAC:32786840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g38660 0.5kb upstream 0.5kb upstream 9792 true Bd4: 43426615-43436406 Brachypodium distachyon
Bradi4g38660 0.5kb upstream 0.5kb upstream 500 false Bd4: 43435907-43436406 Brachypodium distachyon
Bradi4g38660 0.5kb downstream 0.5kb downstream 9792 true Bd4: 43426115-43435906 Brachypodium distachyon
Bradi4g38660 0.5kb downstream 0.5kb downstream 500 false Bd4: 43426115-43426614 Brachypodium distachyon
Bradi4g38660 1.0kb upstream 1.0kb upstream 10292 true Bd4: 43426615-43436906 Brachypodium distachyon
Bradi4g38660 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43435907-43436906 Brachypodium distachyon
Bradi4g38660 1.0kb downstream 1.0kb downstream 10292 true Bd4: 43425615-43435906 Brachypodium distachyon
Bradi4g38660 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43425615-43426614 Brachypodium distachyon
Bradi4g38660 2.0kb upstream 2.0kb upstream 11292 true Bd4: 43426615-43437906 Brachypodium distachyon
Bradi4g38660 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43435907-43437906 Brachypodium distachyon
Bradi4g38660 2.0kb downstream 2.0kb downstream 11292 true Bd4: 43424615-43435906 Brachypodium distachyon
Bradi4g38660 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43424615-43426614 Brachypodium distachyon
Bradi4g38660 5.0kb upstream 5.0kb upstream 14292 true Bd4: 43426615-43440906 Brachypodium distachyon
Bradi4g38660 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43435907-43440906 Brachypodium distachyon
Bradi4g38660 5.0kb downstream 5.0kb downstream 14292 true Bd4: 43421615-43435906 Brachypodium distachyon
Bradi4g38660 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43421615-43426614 Brachypodium distachyon
Bradi4g38660 10.0kb upstream 10.0kb upstream 19292 true Bd4: 43426615-43445906 Brachypodium distachyon
Bradi4g38660 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43435907-43445906 Brachypodium distachyon
Bradi4g38660 10.0kb downstream 10.0kb downstream 19292 true Bd4: 43416615-43435906 Brachypodium distachyon
Bradi4g38660 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43416615-43426614 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571506 5269 Grass View MSA
122046415 5273 Angiosperm View MSA
121346167 5274 Embryophyte View MSA
123425250 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.784        
cufflinks 1.21        
cufflinks 1.216        
cufflinks 1.139        
cufflinks 0.536       Low
cufflinks 1.174        
cufflinks 1.142        
cufflinks 0.883        
cufflinks 1.104        
cufflinks 0.806        
cufflinks 0.851        
cufflinks 1.084        
cufflinks 0.712        
cufflinks 0.628        
cufflinks 0.621        
cufflinks 1.187        
cufflinks 0.616        
cufflinks 1.563       High
cufflinks 0.956        
cufflinks 0.468       Low
cufflinks 0.704        
cufflinks 1.201        
cufflinks 0.866        
cufflinks 0.831        
cufflinks 0.915        
cufflinks 1.151        
cufflinks 0.756        
cufflinks 1.054        
cufflinks 1.046        
cufflinks 1.16        

0 Strain