Gene : Bradi2g30190 B. distachyon v3.1
Defline:  (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  3668
Name:  ? Bradi2g30190 Secondary Identifier:  ? PAC:32771849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g30190 0.5kb upstream 0.5kb upstream 7929 true Bd2: 29423948-29431876 Brachypodium distachyon
Bradi2g30190 0.5kb upstream 0.5kb upstream 500 false Bd2: 29431377-29431876 Brachypodium distachyon
Bradi2g30190 0.5kb downstream 0.5kb downstream 7929 true Bd2: 29423448-29431376 Brachypodium distachyon
Bradi2g30190 0.5kb downstream 0.5kb downstream 500 false Bd2: 29423448-29423947 Brachypodium distachyon
Bradi2g30190 1.0kb upstream 1.0kb upstream 8429 true Bd2: 29423948-29432376 Brachypodium distachyon
Bradi2g30190 1.0kb upstream 1.0kb upstream 1000 false Bd2: 29431377-29432376 Brachypodium distachyon
Bradi2g30190 1.0kb downstream 1.0kb downstream 8429 true Bd2: 29422948-29431376 Brachypodium distachyon
Bradi2g30190 1.0kb downstream 1.0kb downstream 1000 false Bd2: 29422948-29423947 Brachypodium distachyon
Bradi2g30190 2.0kb upstream 2.0kb upstream 9429 true Bd2: 29423948-29433376 Brachypodium distachyon
Bradi2g30190 2.0kb upstream 2.0kb upstream 2000 false Bd2: 29431377-29433376 Brachypodium distachyon
Bradi2g30190 2.0kb downstream 2.0kb downstream 9429 true Bd2: 29421948-29431376 Brachypodium distachyon
Bradi2g30190 2.0kb downstream 2.0kb downstream 2000 false Bd2: 29421948-29423947 Brachypodium distachyon
Bradi2g30190 5.0kb upstream 5.0kb upstream 12429 true Bd2: 29423948-29436376 Brachypodium distachyon
Bradi2g30190 5.0kb upstream 5.0kb upstream 5000 false Bd2: 29431377-29436376 Brachypodium distachyon
Bradi2g30190 5.0kb downstream 5.0kb downstream 12429 true Bd2: 29418948-29431376 Brachypodium distachyon
Bradi2g30190 5.0kb downstream 5.0kb downstream 5000 false Bd2: 29418948-29423947 Brachypodium distachyon
Bradi2g30190 10.0kb upstream 10.0kb upstream 17429 true Bd2: 29423948-29441376 Brachypodium distachyon
Bradi2g30190 10.0kb upstream 10.0kb upstream 10000 false Bd2: 29431377-29441376 Brachypodium distachyon
Bradi2g30190 10.0kb downstream 10.0kb downstream 17429 true Bd2: 29413948-29431376 Brachypodium distachyon
Bradi2g30190 10.0kb downstream 10.0kb downstream 10000 false Bd2: 29413948-29423947 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
124588439 5269 Grass View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 0.689        
cufflinks 0.71        
cufflinks 0.646        
cufflinks 0.633        
cufflinks 0.66        
cufflinks 0.668        
cufflinks 0.646        
cufflinks 0.621        
cufflinks 0.647        
cufflinks 0.614        
cufflinks 0.561        
cufflinks 0.475       Low
cufflinks 0.503       Low
cufflinks 0.556        
cufflinks 0.82        
cufflinks 0.869        
cufflinks 1.092       High
cufflinks 1.065       High
cufflinks 0.854        
cufflinks 1.101       High
cufflinks 0.679        
cufflinks 0.683        
cufflinks 0.594        
cufflinks 0.595        
cufflinks 0.621        
cufflinks 0.567        
cufflinks 0.688        
cufflinks 0.685        
cufflinks 0.753        

0 Strain