Gene : Bradi2g30810 B. distachyon v3.1
Defline:  (1 of 1) PTHR23324//PTHR23324:SF45 - SEC14 RELATED PROTEIN Genomic Order:  3705
Name:  ? Bradi2g30810 Secondary Identifier:  ? PAC:32782274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g30810 0.5kb upstream 0.5kb upstream 15686 true Bd2: 30178135-30193820 Brachypodium distachyon
Bradi2g30810 0.5kb upstream 0.5kb upstream 500 false Bd2: 30178135-30178634 Brachypodium distachyon
Bradi2g30810 0.5kb downstream 0.5kb downstream 15686 true Bd2: 30178635-30194320 Brachypodium distachyon
Bradi2g30810 0.5kb downstream 0.5kb downstream 500 false Bd2: 30193821-30194320 Brachypodium distachyon
Bradi2g30810 1.0kb upstream 1.0kb upstream 16186 true Bd2: 30177635-30193820 Brachypodium distachyon
Bradi2g30810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 30177635-30178634 Brachypodium distachyon
Bradi2g30810 1.0kb downstream 1.0kb downstream 16186 true Bd2: 30178635-30194820 Brachypodium distachyon
Bradi2g30810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 30193821-30194820 Brachypodium distachyon
Bradi2g30810 2.0kb upstream 2.0kb upstream 17186 true Bd2: 30176635-30193820 Brachypodium distachyon
Bradi2g30810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 30176635-30178634 Brachypodium distachyon
Bradi2g30810 2.0kb downstream 2.0kb downstream 17186 true Bd2: 30178635-30195820 Brachypodium distachyon
Bradi2g30810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 30193821-30195820 Brachypodium distachyon
Bradi2g30810 5.0kb upstream 5.0kb upstream 20186 true Bd2: 30173635-30193820 Brachypodium distachyon
Bradi2g30810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 30173635-30178634 Brachypodium distachyon
Bradi2g30810 5.0kb downstream 5.0kb downstream 20186 true Bd2: 30178635-30198820 Brachypodium distachyon
Bradi2g30810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 30193821-30198820 Brachypodium distachyon
Bradi2g30810 10.0kb upstream 10.0kb upstream 25186 true Bd2: 30168635-30193820 Brachypodium distachyon
Bradi2g30810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 30168635-30178634 Brachypodium distachyon
Bradi2g30810 10.0kb downstream 10.0kb downstream 25186 true Bd2: 30178635-30203820 Brachypodium distachyon
Bradi2g30810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 30193821-30203820 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026525 5273 Angiosperm View MSA
124568724 5269 Grass View MSA
121346667 5274 Embryophyte View MSA
123426655 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.284        
cufflinks 2.121        
cufflinks 2.22        
cufflinks 1.933        
cufflinks 2.217        
cufflinks 2.172        
cufflinks 2.081        
cufflinks 2.544        
cufflinks 2.454        
cufflinks 1.847        
cufflinks 2.135        
cufflinks 2.207        
cufflinks 2.287        
cufflinks 1.766        
cufflinks 2.545        
cufflinks 2.191        
cufflinks 2.073        
cufflinks 4.373       High
cufflinks 2.33        
cufflinks 1.604       Low
cufflinks 3.601       High
cufflinks 2.441        
cufflinks 2.427        
cufflinks 2.311        
cufflinks 2.122        
cufflinks 1.893        
cufflinks 2.401        
cufflinks 1.949        
cufflinks 2.046        
cufflinks 2.946       High

0 Strain