Gene : Bradi4g40240 B. distachyon v3.1
Defline:  (1 of 2) PTHR11669//PTHR11669:SF12 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  5184
Name:  ? Bradi4g40240 Secondary Identifier:  ? PAC:32785518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g40240 0.5kb upstream 0.5kb upstream 8951 true Bd4: 44609340-44618290 Brachypodium distachyon
Bradi4g40240 0.5kb upstream 0.5kb upstream 500 false Bd4: 44609340-44609839 Brachypodium distachyon
Bradi4g40240 0.5kb downstream 0.5kb downstream 8951 true Bd4: 44609840-44618790 Brachypodium distachyon
Bradi4g40240 0.5kb downstream 0.5kb downstream 500 false Bd4: 44618291-44618790 Brachypodium distachyon
Bradi4g40240 1.0kb upstream 1.0kb upstream 9451 true Bd4: 44608840-44618290 Brachypodium distachyon
Bradi4g40240 1.0kb upstream 1.0kb upstream 1000 false Bd4: 44608840-44609839 Brachypodium distachyon
Bradi4g40240 1.0kb downstream 1.0kb downstream 9451 true Bd4: 44609840-44619290 Brachypodium distachyon
Bradi4g40240 1.0kb downstream 1.0kb downstream 1000 false Bd4: 44618291-44619290 Brachypodium distachyon
Bradi4g40240 2.0kb upstream 2.0kb upstream 10451 true Bd4: 44607840-44618290 Brachypodium distachyon
Bradi4g40240 2.0kb upstream 2.0kb upstream 2000 false Bd4: 44607840-44609839 Brachypodium distachyon
Bradi4g40240 2.0kb downstream 2.0kb downstream 10451 true Bd4: 44609840-44620290 Brachypodium distachyon
Bradi4g40240 2.0kb downstream 2.0kb downstream 2000 false Bd4: 44618291-44620290 Brachypodium distachyon
Bradi4g40240 5.0kb upstream 5.0kb upstream 13451 true Bd4: 44604840-44618290 Brachypodium distachyon
Bradi4g40240 5.0kb upstream 5.0kb upstream 5000 false Bd4: 44604840-44609839 Brachypodium distachyon
Bradi4g40240 5.0kb downstream 5.0kb downstream 13451 true Bd4: 44609840-44623290 Brachypodium distachyon
Bradi4g40240 5.0kb downstream 5.0kb downstream 5000 false Bd4: 44618291-44623290 Brachypodium distachyon
Bradi4g40240 10.0kb upstream 10.0kb upstream 18451 true Bd4: 44599840-44618290 Brachypodium distachyon
Bradi4g40240 10.0kb upstream 10.0kb upstream 10000 false Bd4: 44599840-44609839 Brachypodium distachyon
Bradi4g40240 10.0kb downstream 10.0kb downstream 18451 true Bd4: 44609840-44628290 Brachypodium distachyon
Bradi4g40240 10.0kb downstream 10.0kb downstream 10000 false Bd4: 44618291-44628290 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569050 5269 Grass View MSA
122045502 5273 Angiosperm View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603        
cufflinks 1.919        
cufflinks 1.889        
cufflinks 1.396        
cufflinks 0.336        
cufflinks 1.548        
cufflinks 1.268        
cufflinks 1.024        
cufflinks 1.259        
cufflinks 0.65        
cufflinks 0.113       Low
cufflinks 1.95        
cufflinks 0.129       Low
cufflinks 0.053     Low Low
cufflinks 0.363        
cufflinks 1.576        
cufflinks 0.761        
cufflinks 2.09        
cufflinks 0.517        
cufflinks 0.092     Low Low
cufflinks 1.375        
cufflinks 1.688        
cufflinks 0.894        
cufflinks 1.013        
cufflinks 1.275        
cufflinks 1.489        
cufflinks 0.039     Low Low
cufflinks 1.023        
cufflinks 1.221        
cufflinks 3.085       High

0 Strain