Gene : Bradi4g39887 B. distachyon v3.1
Defline:  (1 of 1) PTHR24106:SF146 - RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  5138
Name:  ? Bradi4g39887 Secondary Identifier:  ? PAC:32783634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39887 0.5kb upstream 0.5kb upstream 6278 true Bd4: 44392825-44399102 Brachypodium distachyon
Bradi4g39887 0.5kb upstream 0.5kb upstream 500 false Bd4: 44392825-44393324 Brachypodium distachyon
Bradi4g39887 0.5kb downstream 0.5kb downstream 6278 true Bd4: 44393325-44399602 Brachypodium distachyon
Bradi4g39887 0.5kb downstream 0.5kb downstream 500 false Bd4: 44399103-44399602 Brachypodium distachyon
Bradi4g39887 1.0kb upstream 1.0kb upstream 6778 true Bd4: 44392325-44399102 Brachypodium distachyon
Bradi4g39887 1.0kb upstream 1.0kb upstream 1000 false Bd4: 44392325-44393324 Brachypodium distachyon
Bradi4g39887 1.0kb downstream 1.0kb downstream 6778 true Bd4: 44393325-44400102 Brachypodium distachyon
Bradi4g39887 1.0kb downstream 1.0kb downstream 1000 false Bd4: 44399103-44400102 Brachypodium distachyon
Bradi4g39887 2.0kb upstream 2.0kb upstream 7778 true Bd4: 44391325-44399102 Brachypodium distachyon
Bradi4g39887 2.0kb upstream 2.0kb upstream 2000 false Bd4: 44391325-44393324 Brachypodium distachyon
Bradi4g39887 2.0kb downstream 2.0kb downstream 7778 true Bd4: 44393325-44401102 Brachypodium distachyon
Bradi4g39887 2.0kb downstream 2.0kb downstream 2000 false Bd4: 44399103-44401102 Brachypodium distachyon
Bradi4g39887 5.0kb upstream 5.0kb upstream 10778 true Bd4: 44388325-44399102 Brachypodium distachyon
Bradi4g39887 5.0kb upstream 5.0kb upstream 5000 false Bd4: 44388325-44393324 Brachypodium distachyon
Bradi4g39887 5.0kb downstream 5.0kb downstream 10778 true Bd4: 44393325-44404102 Brachypodium distachyon
Bradi4g39887 5.0kb downstream 5.0kb downstream 5000 false Bd4: 44399103-44404102 Brachypodium distachyon
Bradi4g39887 10.0kb upstream 10.0kb upstream 15778 true Bd4: 44383325-44399102 Brachypodium distachyon
Bradi4g39887 10.0kb upstream 10.0kb upstream 10000 false Bd4: 44383325-44393324 Brachypodium distachyon
Bradi4g39887 10.0kb downstream 10.0kb downstream 15778 true Bd4: 44393325-44409102 Brachypodium distachyon
Bradi4g39887 10.0kb downstream 10.0kb downstream 10000 false Bd4: 44399103-44409102 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576846 5269 Grass View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.728        
cufflinks 2.286        
cufflinks 2.218        
cufflinks 2.117        
cufflinks 1.232        
cufflinks 1.859        
cufflinks 1.909        
cufflinks 1.632        
cufflinks 1.924        
cufflinks 1.741        
cufflinks 1.546        
cufflinks 1.575        
cufflinks 1.011        
cufflinks 1.221        
cufflinks 0.786       Low
cufflinks 1.811        
cufflinks 1.588        
cufflinks 2.468       High
cufflinks 1.43        
cufflinks 0.453       Low
cufflinks 1.212        
cufflinks 2.248        
cufflinks 1.401        
cufflinks 1.757        
cufflinks 1.921        
cufflinks 2.105        
cufflinks 1.239        
cufflinks 1.834        
cufflinks 1.958        
cufflinks 1.535        

0 Strain