Gene : Bradi2g33390 B. distachyon v3.1
Defline:  (1 of 2) K02739 - 20S proteasome subunit beta 2 (PSMB7) Genomic Order:  3939
Name:  ? Bradi2g33390 Secondary Identifier:  ? PAC:32779498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g33390 0.5kb upstream 0.5kb upstream 3476 true Bd2: 33256277-33259752 Brachypodium distachyon
Bradi2g33390 0.5kb upstream 0.5kb upstream 500 false Bd2: 33259253-33259752 Brachypodium distachyon
Bradi2g33390 0.5kb downstream 0.5kb downstream 3476 true Bd2: 33255777-33259252 Brachypodium distachyon
Bradi2g33390 0.5kb downstream 0.5kb downstream 500 false Bd2: 33255777-33256276 Brachypodium distachyon
Bradi2g33390 1.0kb upstream 1.0kb upstream 3976 true Bd2: 33256277-33260252 Brachypodium distachyon
Bradi2g33390 1.0kb upstream 1.0kb upstream 1000 false Bd2: 33259253-33260252 Brachypodium distachyon
Bradi2g33390 1.0kb downstream 1.0kb downstream 3976 true Bd2: 33255277-33259252 Brachypodium distachyon
Bradi2g33390 1.0kb downstream 1.0kb downstream 1000 false Bd2: 33255277-33256276 Brachypodium distachyon
Bradi2g33390 2.0kb upstream 2.0kb upstream 4976 true Bd2: 33256277-33261252 Brachypodium distachyon
Bradi2g33390 2.0kb upstream 2.0kb upstream 2000 false Bd2: 33259253-33261252 Brachypodium distachyon
Bradi2g33390 2.0kb downstream 2.0kb downstream 4976 true Bd2: 33254277-33259252 Brachypodium distachyon
Bradi2g33390 2.0kb downstream 2.0kb downstream 2000 false Bd2: 33254277-33256276 Brachypodium distachyon
Bradi2g33390 5.0kb upstream 5.0kb upstream 7976 true Bd2: 33256277-33264252 Brachypodium distachyon
Bradi2g33390 5.0kb upstream 5.0kb upstream 5000 false Bd2: 33259253-33264252 Brachypodium distachyon
Bradi2g33390 5.0kb downstream 5.0kb downstream 7976 true Bd2: 33251277-33259252 Brachypodium distachyon
Bradi2g33390 5.0kb downstream 5.0kb downstream 5000 false Bd2: 33251277-33256276 Brachypodium distachyon
Bradi2g33390 10.0kb upstream 10.0kb upstream 12976 true Bd2: 33256277-33269252 Brachypodium distachyon
Bradi2g33390 10.0kb upstream 10.0kb upstream 10000 false Bd2: 33259253-33269252 Brachypodium distachyon
Bradi2g33390 10.0kb downstream 10.0kb downstream 12976 true Bd2: 33246277-33259252 Brachypodium distachyon
Bradi2g33390 10.0kb downstream 10.0kb downstream 10000 false Bd2: 33246277-33256276 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571922 5269 Grass View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.904     High  
cufflinks 32.401     High  
cufflinks 35.071     High  
cufflinks 33.668     High  
cufflinks 33.693     High  
cufflinks 28.617     High  
cufflinks 29.345     High  
cufflinks 30.165     High  
cufflinks 27.253     High  
cufflinks 31.989     High  
cufflinks 19.239     High Low
cufflinks 30.003     High  
cufflinks 17.19     High Low
cufflinks 18.012     High Low
cufflinks 24.487     High  
cufflinks 33.09     High  
cufflinks 49.618     High High
cufflinks 57.196     High High
cufflinks 56.625     High High
cufflinks 46.159     High High
cufflinks 50.291     High High
cufflinks 30.784     High  
cufflinks 28.059     High  
cufflinks 30.533     High  
cufflinks 30.106     High  
cufflinks 34.995     High  
cufflinks 19.589     High Low
cufflinks 33.883     High  
cufflinks 31.358     High  
cufflinks 45.378     High  

0 Strain