Gene : Bradi4g41190 B. distachyon v3.1
Defline:  (1 of 2) PTHR11699//PTHR11699:SF175 - ALDEHYDE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5303
Name:  ? Bradi4g41190 Secondary Identifier:  ? PAC:32785324
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2724 Brachypodium distachyon pathologic  
Bdistachyon PWY66-21 Brachypodium distachyon pathologic  
Bdistachyon PWY66-389 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41190 0.5kb upstream 0.5kb upstream 5838 true Bd4: 45294853-45300690 Brachypodium distachyon
Bradi4g41190 0.5kb upstream 0.5kb upstream 500 false Bd4: 45300191-45300690 Brachypodium distachyon
Bradi4g41190 0.5kb downstream 0.5kb downstream 5838 true Bd4: 45294353-45300190 Brachypodium distachyon
Bradi4g41190 0.5kb downstream 0.5kb downstream 500 false Bd4: 45294353-45294852 Brachypodium distachyon
Bradi4g41190 1.0kb upstream 1.0kb upstream 6338 true Bd4: 45294853-45301190 Brachypodium distachyon
Bradi4g41190 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45300191-45301190 Brachypodium distachyon
Bradi4g41190 1.0kb downstream 1.0kb downstream 6338 true Bd4: 45293853-45300190 Brachypodium distachyon
Bradi4g41190 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45293853-45294852 Brachypodium distachyon
Bradi4g41190 2.0kb upstream 2.0kb upstream 7338 true Bd4: 45294853-45302190 Brachypodium distachyon
Bradi4g41190 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45300191-45302190 Brachypodium distachyon
Bradi4g41190 2.0kb downstream 2.0kb downstream 7338 true Bd4: 45292853-45300190 Brachypodium distachyon
Bradi4g41190 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45292853-45294852 Brachypodium distachyon
Bradi4g41190 5.0kb upstream 5.0kb upstream 10338 true Bd4: 45294853-45305190 Brachypodium distachyon
Bradi4g41190 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45300191-45305190 Brachypodium distachyon
Bradi4g41190 5.0kb downstream 5.0kb downstream 10338 true Bd4: 45289853-45300190 Brachypodium distachyon
Bradi4g41190 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45289853-45294852 Brachypodium distachyon
Bradi4g41190 10.0kb upstream 10.0kb upstream 15338 true Bd4: 45294853-45310190 Brachypodium distachyon
Bradi4g41190 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45300191-45310190 Brachypodium distachyon
Bradi4g41190 10.0kb downstream 10.0kb downstream 15338 true Bd4: 45284853-45300190 Brachypodium distachyon
Bradi4g41190 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45284853-45294852 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578019 5269 Grass View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166        
cufflinks 0.13        
cufflinks 0.149        
cufflinks 0.207        
cufflinks 0.176        
cufflinks 0.163        
cufflinks 0.13        
cufflinks 0.276        
cufflinks 0.169        
cufflinks 0.203        
cufflinks 0.001     Low Low
cufflinks 0.208        
cufflinks 0.026     Low Low
cufflinks 0.001     Low Low
cufflinks 0.191        
cufflinks 0.079     Low  
cufflinks 0.215        
cufflinks 0.099     Low  
cufflinks 0.179     Low  
cufflinks 0.131     Low  
cufflinks 0.535        
cufflinks 0.157        
cufflinks 0.31        
cufflinks 0.235        
cufflinks 0.193        
cufflinks 0.141        
cufflinks 0.03     Low Low
cufflinks 0.16        
cufflinks 0.173        
cufflinks 0.915       High

0 Strain