Gene : Bradi2g39230 B. distachyon v3.1
Defline:  (1 of 3) PTHR13018//PTHR13018:SF48 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED Genomic Order:  4698
Name:  ? Bradi2g39230 Secondary Identifier:  ? PAC:32780474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39230 0.5kb upstream 0.5kb upstream 7705 true Bd2: 39109851-39117555 Brachypodium distachyon
Bradi2g39230 0.5kb upstream 0.5kb upstream 500 false Bd2: 39109851-39110350 Brachypodium distachyon
Bradi2g39230 0.5kb downstream 0.5kb downstream 7705 true Bd2: 39110351-39118055 Brachypodium distachyon
Bradi2g39230 0.5kb downstream 0.5kb downstream 500 false Bd2: 39117556-39118055 Brachypodium distachyon
Bradi2g39230 1.0kb upstream 1.0kb upstream 8205 true Bd2: 39109351-39117555 Brachypodium distachyon
Bradi2g39230 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39109351-39110350 Brachypodium distachyon
Bradi2g39230 1.0kb downstream 1.0kb downstream 8205 true Bd2: 39110351-39118555 Brachypodium distachyon
Bradi2g39230 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39117556-39118555 Brachypodium distachyon
Bradi2g39230 2.0kb upstream 2.0kb upstream 9205 true Bd2: 39108351-39117555 Brachypodium distachyon
Bradi2g39230 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39108351-39110350 Brachypodium distachyon
Bradi2g39230 2.0kb downstream 2.0kb downstream 9205 true Bd2: 39110351-39119555 Brachypodium distachyon
Bradi2g39230 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39117556-39119555 Brachypodium distachyon
Bradi2g39230 5.0kb upstream 5.0kb upstream 12205 true Bd2: 39105351-39117555 Brachypodium distachyon
Bradi2g39230 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39105351-39110350 Brachypodium distachyon
Bradi2g39230 5.0kb downstream 5.0kb downstream 12205 true Bd2: 39110351-39122555 Brachypodium distachyon
Bradi2g39230 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39117556-39122555 Brachypodium distachyon
Bradi2g39230 10.0kb upstream 10.0kb upstream 17205 true Bd2: 39100351-39117555 Brachypodium distachyon
Bradi2g39230 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39100351-39110350 Brachypodium distachyon
Bradi2g39230 10.0kb downstream 10.0kb downstream 17205 true Bd2: 39110351-39127555 Brachypodium distachyon
Bradi2g39230 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39117556-39127555 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574032 5269 Grass View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.521       High
cufflinks 4.87        
cufflinks 2.232        
cufflinks 3.767        
cufflinks 7.499       High
cufflinks 4.055        
cufflinks 4.542        
cufflinks 4.838        
cufflinks 3.378        
cufflinks 1.576       Low
cufflinks 9.903     High High
cufflinks 7.413       High
cufflinks 4.418        
cufflinks 5.721        
cufflinks 5.04        
cufflinks 3.937        
cufflinks 2.825        
cufflinks 1.857       Low
cufflinks 10.232       High
cufflinks 6.628        
cufflinks 1.06       Low
cufflinks 2.644        
cufflinks 5.588        
cufflinks 3.482        
cufflinks 3.486        
cufflinks 2.418        
cufflinks 1.501       Low
cufflinks 2.093        
cufflinks 1.948       Low
cufflinks 3.331        

0 Strain