Gene : Bradi2g39420 B. distachyon v3.1
Defline:  (1 of 3) 3.6.3.47 - Fatty-acyl-CoA-transporting ATPase Genomic Order:  4721
Name:  ? Bradi2g39420 Secondary Identifier:  ? PAC:32777620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39420 0.5kb upstream 0.5kb upstream 11425 true Bd2: 39238724-39250148 Brachypodium distachyon
Bradi2g39420 0.5kb upstream 0.5kb upstream 500 false Bd2: 39238724-39239223 Brachypodium distachyon
Bradi2g39420 0.5kb downstream 0.5kb downstream 11425 true Bd2: 39239224-39250648 Brachypodium distachyon
Bradi2g39420 0.5kb downstream 0.5kb downstream 500 false Bd2: 39250149-39250648 Brachypodium distachyon
Bradi2g39420 1.0kb upstream 1.0kb upstream 11925 true Bd2: 39238224-39250148 Brachypodium distachyon
Bradi2g39420 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39238224-39239223 Brachypodium distachyon
Bradi2g39420 1.0kb downstream 1.0kb downstream 11925 true Bd2: 39239224-39251148 Brachypodium distachyon
Bradi2g39420 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39250149-39251148 Brachypodium distachyon
Bradi2g39420 2.0kb upstream 2.0kb upstream 12925 true Bd2: 39237224-39250148 Brachypodium distachyon
Bradi2g39420 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39237224-39239223 Brachypodium distachyon
Bradi2g39420 2.0kb downstream 2.0kb downstream 12925 true Bd2: 39239224-39252148 Brachypodium distachyon
Bradi2g39420 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39250149-39252148 Brachypodium distachyon
Bradi2g39420 5.0kb upstream 5.0kb upstream 15925 true Bd2: 39234224-39250148 Brachypodium distachyon
Bradi2g39420 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39234224-39239223 Brachypodium distachyon
Bradi2g39420 5.0kb downstream 5.0kb downstream 15925 true Bd2: 39239224-39255148 Brachypodium distachyon
Bradi2g39420 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39250149-39255148 Brachypodium distachyon
Bradi2g39420 10.0kb upstream 10.0kb upstream 20925 true Bd2: 39229224-39250148 Brachypodium distachyon
Bradi2g39420 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39229224-39239223 Brachypodium distachyon
Bradi2g39420 10.0kb downstream 10.0kb downstream 20925 true Bd2: 39239224-39260148 Brachypodium distachyon
Bradi2g39420 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39250149-39260148 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586419 5269 Grass View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.641        
cufflinks 9.592        
cufflinks 9.69        
cufflinks 8.087        
cufflinks 2.306       Low
cufflinks 9.215        
cufflinks 7.164        
cufflinks 8.845        
cufflinks 9.97     High  
cufflinks 4.599        
cufflinks 3.265        
cufflinks 9.436     High  
cufflinks 4.645        
cufflinks 2.515       Low
cufflinks 4.872        
cufflinks 8.47        
cufflinks 4.998        
cufflinks 6.485        
cufflinks 4.738        
cufflinks 0.844       Low
cufflinks 7.24        
cufflinks 9.847        
cufflinks 8.593        
cufflinks 8.828        
cufflinks 7.078        
cufflinks 7.342        
cufflinks 4.302        
cufflinks 6.234        
cufflinks 7.338        
cufflinks 13.278     High High

0 Strain